RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 NDUFB10O96000 172 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 SLC1A4P43007 532 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
CSDC2-202ENST00000460790 PKN1Q16512 942 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
CSDC2-202ENST00000460790 ZNF526Q8TF50 670 aaPredicted RBP12.64□□□□□ -0.39
CSDC2-202ENST00000460790 WASF1Q92558 559 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 RIOX1Q9H6W3 641 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
CSDC2-202ENST00000460790 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
CSDC2-202ENST00000460790 WDR33Q9C0J8 1336 aaKnown RBP12.63□□□□□ -0.39
CSDC2-202ENST00000460790 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 TRAF5O00463 557 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 BMP3P12645 472 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 CCDC96Q2M329 555 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 TTBK2Q6IQ55 1244 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 KCTD1Q719H9 257 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 ARMC9Q7Z3E5 817 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 UBA5Q9GZZ9 404 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
CSDC2-202ENST00000460790 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 ZHX2Q9Y6X8 837 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
CSDC2-202ENST00000460790 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 USP17L10C9JJH3 530 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 H3BQV1 296 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 RAD21O60216 631 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
CSDC2-202ENST00000460790 SPP2Q13103 211 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 VGLL4Q14135 290 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 TTLL12Q14166 644 aaPredicted RBP12.62□□□□□ -0.39
CSDC2-202ENST00000460790 LDLRAD1Q5T700 205 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 MOB2Q70IA6 237 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 AIFM3Q96NN9 605 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 CPVLQ9H3G5 476 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 CSADQ9Y600 493 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 SNCAIPQ9Y6H5 919 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 PTPRFP10586 1907 aa12.62□□□□□ -0.39
CSDC2-202ENST00000460790 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 C19orf81C9J6K1 198 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 PLA2G6O60733 806 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
CSDC2-202ENST00000460790 SCG2P13521 617 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 USP14P54578 494 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 BACE1P56817 501 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 FKBP1BP68106 108 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 FMR1Q06787 632 aaKnown RBP eCLIP12.61□□□□□ -0.39
CSDC2-202ENST00000460790 PFKFB3Q16875 520 aaPredicted RBP12.61□□□□□ -0.39
CSDC2-202ENST00000460790 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 SPICE1Q8N0Z3 855 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 LPAR1Q92633 364 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
CSDC2-202ENST00000460790 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
CSDC2-202ENST00000460790 FEZ1Q99689 392 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
CSDC2-202ENST00000460790 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
CSDC2-202ENST00000460790 TMEM232C9JQI7 657 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 F13A1P00488 732 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 SLC16A2P36021 539 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 FOSBP53539 338 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 PPATQ06203 517 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 MTMR2Q13614 643 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
CSDC2-202ENST00000460790 FAM83BQ5T0W9 1011 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
CSDC2-202ENST00000460790 KRT40Q6A162 431 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 OTUD7BQ6GQQ9 843 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 ERO1BQ86YB8 467 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
CSDC2-202ENST00000460790 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
CSDC2-202ENST00000460790 C12orf42Q96LP6 360 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 PIGSQ96S52 555 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 SH3GLB2Q9NR46 395 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 EMILIN3Q9NT22 766 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
CSDC2-202ENST00000460790 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 PNMA6FA0A0J9YX94 578 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
CSDC2-202ENST00000460790 XBP1P17861 261 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 GUCY1B3Q02153 619 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 TRIM29Q14134 588 aa12.59□□□□□ -0.39
CSDC2-202ENST00000460790 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms