RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 DDX41Q9UJV9 622 aaKnown RBP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 EPN1Q9Y6I3 576 aaPredicted RBP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 CCZ1BP86790 482 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 CCZ1P86791 482 aaPredicted RBP13.48□□□□□ -0.25
CPNE6-202ENST00000460657 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 EPSTI1Q96J88 318 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 PANX2Q96RD6 677 aa13.48□□□□□ -0.25
CPNE6-202ENST00000460657 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 TRAF1Q13077 416 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 NAA30Q147X3 362 aaPredicted RBP13.47□□□□□ -0.25
CPNE6-202ENST00000460657 ARMCX5Q6P1M9 558 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 SNX29Q8TEQ0 813 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 PAGE5Q96GU1 130 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 CCNL1Q9UK58 526 aaPredicted RBP13.47□□□□□ -0.25
CPNE6-202ENST00000460657 PXDNQ92626 1479 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 CLCN6P51797 869 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 ADCY7P51828 1080 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
CPNE6-202ENST00000460657 BCCIPQ9P287 314 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPNE6-202ENST00000460657 A0A0G2JLW4 131 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 CSF1RP07333 972 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 ANTXR2P58335 489 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 PRPF4BQ13523 1007 aaKnown RBP13.47□□□□□ -0.25
CPNE6-202ENST00000460657 CALCRLQ16602 461 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 TMEM232C9JQI7 657 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 MYO1AQ9UBC5 1043 aa13.47□□□□□ -0.25
CPNE6-202ENST00000460657 SPDYE3A6NKU9 549 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 SNAP23O00161 211 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 AP5Z1O43299 807 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 OR52Z1P0C646 297 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 MAGEA1P43355 309 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 FAM76AQ8TAV0 307 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 C8orf37Q96NL8 207 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 EYA3Q99504 573 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
CPNE6-202ENST00000460657 GSG1L2A8MUP6 293 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 KCNJ6P48051 423 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 DYMQ7RTS9 669 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 MON2Q7Z3U7 1717 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 LMBR1Q8WVP7 490 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 GGA1Q9UJY5 639 aa13.46□□□□□ -0.25
CPNE6-202ENST00000460657 SOWAHDA6NJG2 315 aa13.46□□□□□ -0.26
CPNE6-202ENST00000460657 KLRF2D3W0D1 207 aa13.46□□□□□ -0.26
CPNE6-202ENST00000460657 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.26
CPNE6-202ENST00000460657 ZNF658Q5TYW1 1059 aaPredicted RBP13.46□□□□□ -0.26
CPNE6-202ENST00000460657 TAX1BP1Q86VP1 789 aa13.46□□□□□ -0.26
CPNE6-202ENST00000460657 SLC35F6Q8N357 371 aa13.46□□□□□ -0.26
CPNE6-202ENST00000460657 AFAP1L1Q8TED9 768 aa13.46□□□□□ -0.26
CPNE6-202ENST00000460657 PCDHA4Q9UN74 947 aa13.46□□□□□ -0.26
CPNE6-202ENST00000460657 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.46□□□□□ -0.26
CPNE6-202ENST00000460657 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
CPNE6-202ENST00000460657 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 RWDD2AQ9UIY3 292 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 C3P01024 1663 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 EEF1GP26641 437 aaKnown RBP13.45□□□□□ -0.26
CPNE6-202ENST00000460657 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
CPNE6-202ENST00000460657 MAGEF1Q9HAY2 307 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 GOPCQ9HD26 462 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 LAD1O00515 517 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 SLC9C1Q4G0N8 1177 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 TBC1D5Q92609 795 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 ZNF804BA4D1E1 1349 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 CTIFO43310 598 aaKnown RBP13.45□□□□□ -0.26
CPNE6-202ENST00000460657 COBLO75128 1261 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 SEC31AO94979 1220 aaKnown RBP13.45□□□□□ -0.26
CPNE6-202ENST00000460657 TNNC1P63316 161 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 ANKRD7Q92527 254 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 IFIH1Q9BYX4 1025 aaKnown RBP13.45□□□□□ -0.26
CPNE6-202ENST00000460657 GLT8D2Q9H1C3 349 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 CUEDC2Q9H467 287 aa13.45□□□□□ -0.26
CPNE6-202ENST00000460657 PLEKHA8P1O95397 391 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 C8orf74Q6P047 294 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 METTL16Q86W50 562 aaKnown RBP13.44□□□□□ -0.26
CPNE6-202ENST00000460657 FAM207AQ9NSI2 230 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-202ENST00000460657 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
CPNE6-202ENST00000460657 VWA3BQ502W6 1294 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 E4F1Q66K89 784 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-202ENST00000460657 OXER1Q8TDS5 423 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 GOLGA6L10A0A0M3HER8 536 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 CCDC151A5D8V7 595 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 RPL13P26373 211 aaKnown RBP13.44□□□□□ -0.26
CPNE6-202ENST00000460657 KMT5BQ4FZB7 885 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 RNF187Q5TA31 235 aaPredicted RBP13.44□□□□□ -0.26
CPNE6-202ENST00000460657 TMTC3Q6ZXV5 915 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 C2CD5Q86YS7 1000 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 IFT81Q8WYA0 676 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
CPNE6-202ENST00000460657 EBAG9O00559 213 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms