RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 SLFN13Q68D06 897 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 TMTC2Q8N394 836 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 PROCA1Q8NCQ7 364 aaPredicted RBP12□□□□□ -0.49
GARNL3-211ENST00000460176 LPAR1Q92633 364 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 BRF1Q92994 677 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
GARNL3-211ENST00000460176 GOPCQ9HD26 462 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 TMOD4Q9NZQ9 345 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 BRPF3Q9ULD4 1205 aa12□□□□□ -0.49
GARNL3-211ENST00000460176 SNHG28P0DPA3 235 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 PDHBP11177 359 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 VCAM1P19320 739 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 AK2P54819 239 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 EVCP57679 992 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 FGD1P98174 961 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 TROAPQ12815 778 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 TREML2Q5T2D2 321 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 GPAT2Q6NUI2 795 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 FASTKD5Q7L8L6 764 aaKnown RBP11.99□□□□□ -0.49
GARNL3-211ENST00000460176 SPICE1Q8N0Z3 855 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 GMCL1Q96IK5 515 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 NUP88Q99567 741 aaPredicted RBP11.99□□□□□ -0.49
GARNL3-211ENST00000460176 PTPN18Q99952 460 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 AGTPBP1Q9UPW5 1226 aa11.99□□□□□ -0.49
GARNL3-211ENST00000460176 NID2Q14112 1375 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 KLF18A0A0U1RQI7 1052 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 CCDC69A6NI79 296 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 IGF2BP3O00425 579 aaKnown RBP eCLIP11.98□□□□□ -0.49
GARNL3-211ENST00000460176 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
GARNL3-211ENST00000460176 RAD21O60216 631 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 DDAH1O94760 285 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 TM4SF4P48230 202 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 FAM83BQ5T0W9 1011 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 APOA5Q6Q788 366 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 CATIPQ7Z7H3 387 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 FAM43AQ8N2R8 423 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 CHMP4CQ96CF2 233 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 MYL10Q9BUA6 226 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
GARNL3-211ENST00000460176 MTMR7Q9Y216 660 aa11.98□□□□□ -0.49
GARNL3-211ENST00000460176 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
GARNL3-211ENST00000460176 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 BMP3P12645 472 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 MAP2K2P36507 400 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 INHBEP58166 350 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 GRM4Q14833 912 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 MAP3K14Q99558 947 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
GARNL3-211ENST00000460176 TPCN1Q9ULQ1 816 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 SLC12A7Q9Y666 1083 aa11.97□□□□□ -0.49
GARNL3-211ENST00000460176 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-211ENST00000460176 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-211ENST00000460176 GOLGA8BA8MQT2 603 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 PDHXO00330 501 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 ZBTB43O43298 467 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 CALM1P0DP23 149 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 CALM2P0DP24 149 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 CALM3P0DP25 149 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 RXRAP19793 462 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
GARNL3-211ENST00000460176 SLC1A4P43007 532 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 RCAN1P53805 252 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 ANKRD1Q15327 319 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 CCDC96Q2M329 555 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 ASPRV1Q53RT3 343 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 KCTD1Q719H9 257 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 MICU3Q86XE3 530 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 DNAJC5GQ8N7S2 189 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 IL27Q8NEV9 243 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 ZCCHC17Q9NP64 241 aaKnown RBP11.96□□□□□ -0.49
GARNL3-211ENST00000460176 MAD2L2Q9UI95 211 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 SLC45A1Q9Y2W3 748 aa11.96□□□□□ -0.49
GARNL3-211ENST00000460176 CD2BP2O95400 341 aaKnown RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 LARGE1O95461 756 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 GOLGA8HP0CJ92 632 aa11.95□□□□□ -0.5
GARNL3-211ENST00000460176 PDIA3P30101 505 aaKnown RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-211ENST00000460176 PABPC4Q13310 644 aaKnown RBP eCLIP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms