RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
HERC4-207ENST00000460168 DDTLA6NHG4 134 aaPredicted RBP11.9□□□□□ -0.5
HERC4-207ENST00000460168 PPP1R12AO14974 1030 aaPredicted RBP11.9□□□□□ -0.5
HERC4-207ENST00000460168 DEXIO95424 95 aa11.9□□□□□ -0.5
HERC4-207ENST00000460168 SCP2P22307 547 aa11.9□□□□□ -0.5
HERC4-207ENST00000460168 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.5
HERC4-207ENST00000460168 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
HERC4-207ENST00000460168 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
HERC4-207ENST00000460168 FHDC1Q9C0D6 1143 aaPredicted RBP11.9□□□□□ -0.5
HERC4-207ENST00000460168 MTMR7Q9Y216 660 aa11.9□□□□□ -0.5
HERC4-207ENST00000460168 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 MYO1BO43795 1136 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 ENTPD3O75355 529 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 PLEKHA8P1O95397 391 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 SHMT1P34896 483 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 C11orf91Q3C1V1 193 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 TMEM47Q9BQJ4 181 aa11.9□□□□□ -0.51
HERC4-207ENST00000460168 AKR1B1P15121 316 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 GUCY1A2P33402 732 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 TNNT3P45378 269 aaPredicted RBP11.89□□□□□ -0.51
HERC4-207ENST00000460168 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
HERC4-207ENST00000460168 GNL2Q13823 731 aaKnown RBP11.89□□□□□ -0.51
HERC4-207ENST00000460168 SWT1Q5T5J6 900 aaKnown RBP11.89□□□□□ -0.51
HERC4-207ENST00000460168 KRT40Q6A162 431 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 TMTC3Q6ZXV5 915 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
HERC4-207ENST00000460168 VEZTQ9HBM0 779 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 TFIP11Q9UBB9 837 aaKnown RBP11.89□□□□□ -0.51
HERC4-207ENST00000460168 PLIN4Q96Q06 1357 aa11.89□□□□□ -0.51
HERC4-207ENST00000460168 FAM196BA6NMK8 535 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 MBD3O95983 291 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 UVSSAQ2YD98 709 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 C1QTNF12Q5T7M4 302 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 SH3BP5LQ7L8J4 393 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 ZNF70Q9UC06 446 aaPredicted RBP11.88□□□□□ -0.51
HERC4-207ENST00000460168 CFAP45Q9UL16 551 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 MYH6P13533 1939 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 ATRNL1Q5VV63 1379 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 RAD21O60216 631 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 SLURP2P0DP57 97 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 TOP1P11387 765 aaKnown RBP11.88□□□□□ -0.51
HERC4-207ENST00000460168 XBP1P17861 261 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 JMYQ8N9B5 988 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 MAP3K14Q99558 947 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 DNAJC18Q9H819 358 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 MTMR4Q9NYA4 1195 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 GJA3Q9Y6H8 435 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 RPS6KL1Q9Y6S9 549 aa11.88□□□□□ -0.51
HERC4-207ENST00000460168 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
HERC4-207ENST00000460168 CTAGE5O15320 804 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 RPS12P25398 132 aaKnown RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 PRELPP51888 382 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 FUT2Q10981 343 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 CERKLQ49MI3 558 aaPredicted RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 CAVIN1Q6NZI2 390 aaKnown RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 ARHGAP27Q6ZUM4 889 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 BRAPQ7Z569 592 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 FOXP4Q8IVH2 680 aaPredicted RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 SRBD1Q8N5C6 995 aaKnown RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.87□□□□□ -0.51
HERC4-207ENST00000460168 GRPEL1Q9HAV7 217 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 SIPA1L1O43166 1804 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 MYH15Q9Y2K3 1946 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 hCG_1642624A0A1W2PR95 340 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 FZD9O00144 591 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 WNT10BO00744 389 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 PRPF3O43395 683 aaKnown RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 TTLL1O95922 423 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 GNAQP50148 359 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 UBE2HP62256 183 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 KIF23Q02241 960 aaPredicted RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 GRM4Q14833 912 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
HERC4-207ENST00000460168 ZNF396Q96N95 335 aaPredicted RBP11.87□□□□□ -0.51
HERC4-207ENST00000460168 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
HERC4-207ENST00000460168 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
HERC4-207ENST00000460168 SHTN1A0MZ66 631 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 RBM26Q5T8P6 1007 aaKnown RBP11.86□□□□□ -0.51
HERC4-207ENST00000460168 CLEC10AQ8IUN9 316 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 STAG2Q8N3U4 1231 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 FAM151AQ8WW52 585 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 PIBF1Q8WXW3 757 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 ELP1O95163 1332 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 GOLGA6CA6NDK9 693 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 GOLGA6BA6NDN3 693 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
HERC4-207ENST00000460168 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms