RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GMCL1P1Q8NEA9 526 aa28.17■■■□□ 2.1
U2AF1-204ENST00000459639 GPT2Q8TD30 523 aa28.17■■■□□ 2.1
U2AF1-204ENST00000459639 DCAF4Q8WV16 495 aa28.17■■■□□ 2.1
U2AF1-204ENST00000459639 RIOX1Q9H6W3 641 aa28.17■■■□□ 2.1
U2AF1-204ENST00000459639 FRMPD2Q68DX3 1309 aaPredicted RBP28.17■■■□□ 2.1
U2AF1-204ENST00000459639 CAP2P40123 477 aa28.16■■■□□ 2.1
U2AF1-204ENST00000459639 USP28Q96RU2 1077 aa28.16■■■□□ 2.1
U2AF1-204ENST00000459639 SCAF8Q9UPN6 1271 aaKnown RBP28.16■■■□□ 2.1
U2AF1-204ENST00000459639 GADD45BO75293 160 aaPredicted RBP28.16■■■□□ 2.1
U2AF1-204ENST00000459639 GPR162Q16538 588 aa28.16■■■□□ 2.1
U2AF1-204ENST00000459639 NOSTRINQ8IVI9 506 aa28.16■■■□□ 2.1
U2AF1-204ENST00000459639 PPP2R3BQ9Y5P8 575 aa28.16■■■□□ 2.1
U2AF1-204ENST00000459639 ZC3H4Q9UPT8 1303 aaKnown RBP28.16■■■□□ 2.1
U2AF1-204ENST00000459639 BTBD18B2RXH4 712 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 PIBF1Q8WXW3 757 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 HOOK2Q96ED9 719 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 RRP36Q96EU6 259 aaKnown RBP28.15■■■□□ 2.1
U2AF1-204ENST00000459639 ARHGEF10LQ9HCE6 1279 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 BRMS1Q9HCU9 246 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 ADARB2Q9NS39 739 aaKnown RBP28.15■■■□□ 2.1
U2AF1-204ENST00000459639 GGA3Q9NZ52 723 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 RTEL1Q9NZ71 1219 aa28.15■■■□□ 2.1
U2AF1-204ENST00000459639 PITPNM2Q9BZ72 1349 aa28.14■■■□□ 2.1
U2AF1-204ENST00000459639 KRT2P35908 639 aa28.14■■■□□ 2.1
U2AF1-204ENST00000459639 CCDC96Q2M329 555 aa28.14■■■□□ 2.1
U2AF1-204ENST00000459639 SLFN13Q68D06 897 aa28.14■■■□□ 2.1
U2AF1-204ENST00000459639 RCOR1Q9UKL0 485 aa28.14■■■□□ 2.1
U2AF1-204ENST00000459639 GRIN3BO60391 1043 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 HIRAP54198 1017 aaPredicted RBP28.13■■■□□ 2.09
U2AF1-204ENST00000459639 GMCL1Q96IK5 515 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 CPVLQ9H3G5 476 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 GINM1Q9NU53 330 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 POLR3EQ9NVU0 708 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 SEC63Q9UGP8 760 aaKnown RBP28.13■■■□□ 2.09
U2AF1-204ENST00000459639 DOCK1Q14185 1865 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 PHF20L1A8MW92 1017 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 ASNSP08243 561 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 CCDC148Q8NFR7 591 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 GPCPD1Q9NPB8 672 aa28.13■■■□□ 2.09
U2AF1-204ENST00000459639 CALML3P27482 149 aa28.12■■■□□ 2.09
U2AF1-204ENST00000459639 DCAF15Q66K64 600 aa28.12■■■□□ 2.09
U2AF1-204ENST00000459639 DPY19L2Q6NUT2 758 aa28.12■■■□□ 2.09
U2AF1-204ENST00000459639 FTOQ9C0B1 505 aaKnown RBP eCLIP28.12■■■□□ 2.09
U2AF1-204ENST00000459639 UBA5Q9GZZ9 404 aa28.12■■■□□ 2.09
U2AF1-204ENST00000459639 BARHL2Q9NY43 387 aa28.12■■■□□ 2.09
U2AF1-204ENST00000459639 POLR2AP24928 1970 aaKnown RBP28.11■■■□□ 2.09
U2AF1-204ENST00000459639 F5H6K3 240 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 hCG_1984214I3L0E3 225 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 YEATS4O95619 227 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 VEGFAP15692 232 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-204ENST00000459639 SLC1A4P43007 532 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 NASPP49321 788 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-204ENST00000459639 KLRC3Q07444 240 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 NPY5RQ15761 445 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 WWC2Q6AWC2 1192 aa28.11■■■□□ 2.09
U2AF1-204ENST00000459639 ZNF713Q8N859 430 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-204ENST00000459639 GPKOWQ92917 476 aaPredicted RBP eCLIP28.11■■■□□ 2.09
U2AF1-204ENST00000459639 L3MBTL3Q96JM7 780 aaPredicted RBP28.11■■■□□ 2.09
U2AF1-204ENST00000459639 A0A1W2PRG0 241 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 NLRP5P59047 1200 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 CEBPZQ03701 1054 aaKnown RBP28.1■■■□□ 2.09
U2AF1-204ENST00000459639 NBPF12Q5TAG4 269 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-204ENST00000459639 OXER1Q8TDS5 423 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 TMX2Q9Y320 296 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 STXBP3O00186 592 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 NDUFB10O96000 172 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 NR5A1Q13285 461 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 KCTD1Q719H9 257 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 HEATR3Q7Z4Q2 680 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 CCDC12Q8WUD4 166 aaPredicted RBP28.1■■■□□ 2.09
U2AF1-204ENST00000459639 PIGSQ96S52 555 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 SH2D4AQ9H788 454 aa28.1■■■□□ 2.09
U2AF1-204ENST00000459639 ANO1Q5XXA6 986 aa28.09■■■□□ 2.09
U2AF1-204ENST00000459639 GALNT17Q6IS24 598 aa28.09■■■□□ 2.09
U2AF1-204ENST00000459639 HOMER1Q86YM7 354 aa28.09■■■□□ 2.09
U2AF1-204ENST00000459639 RAD21O60216 631 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 RILPL1Q5EBL4 403 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 TTBK2Q6IQ55 1244 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 ZNF341Q9BYN7 854 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 VAT1LQ9HCJ6 419 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 GOPCQ9HD26 462 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 CLIC4Q9Y696 253 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 SCN4AP35499 1836 aa28.08■■■□□ 2.09
U2AF1-204ENST00000459639 CTNND1O60716 968 aaKnown RBP28.07■■■□□ 2.08
U2AF1-204ENST00000459639 CAVIN1Q6NZI2 390 aaKnown RBP28.07■■■□□ 2.08
U2AF1-204ENST00000459639 ADGRF4Q8IZF3 695 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 DAGLBQ8NCG7 672 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 LINC00301Q8NCQ3 95 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 KCNG4Q8TDN1 519 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 TNFRSF25Q93038 417 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 GZF1Q9H116 711 aaPredicted RBP28.07■■■□□ 2.08
U2AF1-204ENST00000459639 JMJD4Q9H9V9 463 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 GOLGA6L4A6NEF3 574 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 ECE1P42892 770 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 STK38Q15208 465 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 TYW1BQ6NUM6 668 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 MTMR8Q96EF0 704 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 PCDHA4Q9UN74 947 aa28.07■■■□□ 2.08
U2AF1-204ENST00000459639 ACER1Q8TDN7 264 aa28.06■■■□□ 2.08
U2AF1-204ENST00000459639 PGBD1Q96JS3 809 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms