RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IDI2Q9BXS1 227 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 MYOZ2Q9NPC6 264 aa10.41□□□□□ -0.74
VPS50-207ENST00000458530 RBM28Q9NW13 759 aaKnown RBP10.41□□□□□ -0.74
VPS50-207ENST00000458530 SAP30BPQ9UHR5 308 aaKnown RBP10.41□□□□□ -0.74
VPS50-207ENST00000458530 PLIN4Q96Q06 1357 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 STK36Q9NRP7 1315 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 UBE2Q2LH0YL09 131 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 MYO1BO43795 1136 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 BAG4O95429 457 aaKnown RBP10.4□□□□□ -0.74
VPS50-207ENST00000458530 F13A1P00488 732 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 CYP2D6P10635 497 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 PICALMQ13492 652 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 RTN1Q16799 776 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 CFAP100Q494V2 611 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 LDLRAD1Q5T700 205 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 APOBEC3HQ6NTF7 200 aaKnown RBP10.4□□□□□ -0.74
VPS50-207ENST00000458530 GPR153Q6NV75 609 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 CDC42EP5Q6NZY7 148 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 ZNF654Q8IZM8 581 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 ARMC5Q96C12 935 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 MXD3Q9BW11 206 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
VPS50-207ENST00000458530 EHD4Q9H223 541 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 TCP11L1Q9NUJ3 509 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 BRPF3Q9ULD4 1205 aa10.4□□□□□ -0.74
VPS50-207ENST00000458530 GREB1LQ9C091 1923 aaPredicted RBP10.4□□□□□ -0.74
VPS50-207ENST00000458530 CUL9Q8IWT3 2517 aa10.4□□□□□ -0.75
VPS50-207ENST00000458530 SIPA1L1O43166 1804 aa10.4□□□□□ -0.75
VPS50-207ENST00000458530 CENPFP49454 3210 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 ENTPD3O75355 529 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 PRDM1O75626 825 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 KIF5BP33176 963 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 CDK8P49336 464 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 SREBF2Q12772 1141 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 TRIM29Q14134 588 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 DLGAP5Q15398 846 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 SEC23AQ15436 765 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 OTOP1Q7RTM1 612 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 ENAHQ8N8S7 591 aaPredicted RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 CTCFLQ8NI51 663 aaPredicted RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 ZKSCAN3Q9BRR0 538 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 ZSCAN16Q9H4T2 348 aaPredicted RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 KAT14Q9H8E8 782 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 SERPINB13Q9UIV8 391 aa10.39□□□□□ -0.75
VPS50-207ENST00000458530 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
VPS50-207ENST00000458530 JAK2O60674 1132 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 XBP1P17861 261 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 NCLP19338 710 aaKnown RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 GNAQP50148 359 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 TFAP4Q01664 338 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 AKAP17AQ02040 695 aaKnown RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 SSRP1Q08945 709 aaKnown RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 PKP1Q13835 747 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 NBPF9Q3BBW0 867 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 FKBP1CQ5VVH2 108 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 SPRYD7Q5W111 196 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 CRACR2BQ8N4Y2 399 aaPredicted RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 MTMR14Q8NCE2 650 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 DDX11Q96FC9 970 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 ZBED3Q96IU2 234 aaPredicted RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 CCDC17Q96LX7 622 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 MAP3K14Q99558 947 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 INCENPQ9NQS7 918 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 ORC3Q9UBD5 711 aaPredicted RBP10.38□□□□□ -0.75
VPS50-207ENST00000458530 MTMR6Q9Y217 621 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 TACC3Q9Y6A5 838 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 ATRNL1Q5VV63 1379 aa10.38□□□□□ -0.75
VPS50-207ENST00000458530 WNT10BO00744 389 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 IFNAR1P17181 557 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 RASA1P20936 1047 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 PLCD1P51178 756 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 MAP3K11Q16584 847 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 FAM47AQ5JRC9 791 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 MCTP1Q6DN14 999 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 ZSCAN29Q8IWY8 852 aaPredicted RBP10.37□□□□□ -0.75
VPS50-207ENST00000458530 FANCBQ8NB91 859 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 NEDD1Q8NHV4 660 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 NUP133Q8WUM0 1156 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 C8orf76Q96K31 380 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 PI4KBQ9UBF8 816 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 ZDHHC9Q9Y397 364 aa10.37□□□□□ -0.75
VPS50-207ENST00000458530 DEXIO95424 95 aa10.36□□□□□ -0.75
VPS50-207ENST00000458530 FMNL1O95466 1100 aaPredicted RBP10.36□□□□□ -0.75
VPS50-207ENST00000458530 CTDNEP1O95476 244 aa10.36□□□□□ -0.75
VPS50-207ENST00000458530 TNNI2P48788 182 aa10.36□□□□□ -0.75
VPS50-207ENST00000458530 INHBEP58166 350 aa10.36□□□□□ -0.75
VPS50-207ENST00000458530 KRT85P78386 507 aa10.36□□□□□ -0.75
VPS50-207ENST00000458530 CAP1Q01518 475 aa10.36□□□□□ -0.75
VPS50-207ENST00000458530 GABPAQ06546 454 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms