RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 MICU3Q86XE3 530 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 ZNF654Q8IZM8 581 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 STAG2Q8N3U4 1231 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 IL17RAQ96F46 866 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 UBA5Q9GZZ9 404 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 KIAA1683Q9H0B3 1180 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 RPAP3Q9H6T3 665 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 GOPCQ9HD26 462 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 TPCN1Q9ULQ1 816 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 SLC12A7Q9Y666 1083 aa10.16□□□□□ -0.78
CLTCL1-204ENST00000458188 BTBD19C9JJ37 291 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 TMEM232C9JQI7 657 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 LARGE1O95461 756 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 CYP2C8P10632 490 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 PDHBP11177 359 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 CETPP11597 493 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 VCAM1P19320 739 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 LIFRP42702 1097 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 SLC1A4P43007 532 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 USP14P54578 494 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 SYNE3Q6ZMZ3 975 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 FAM43AQ8N2R8 423 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 NECAB1Q8N987 351 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 PIBF1Q8WXW3 757 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 TANGO6Q9C0B7 1094 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 SH2D4AQ9H788 454 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 VAT1LQ9HCJ6 419 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 FBXO28Q9NVF7 368 aa10.15□□□□□ -0.78
CLTCL1-204ENST00000458188 LAMB1P07942 1786 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 WDR19Q8NEZ3 1342 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 MANSC4A6NHS7 340 aaPredicted RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 GOLGA8BA8MQT2 603 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 PDHXO00330 501 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 IGF2BP3O00425 579 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 ZBTB43O43298 467 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 BMP3P12645 472 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 PDIA3P30101 505 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 NT5C2P49902 561 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 TROAPQ12815 778 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 IKQ13123 557 aaPredicted RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 APOA5Q6Q788 366 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 FASTKD5Q7L8L6 764 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 TMTC2Q8N394 836 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 GMCL1P1Q8NEA9 526 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 KIFC2Q96AC6 838 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 P2RX7Q99572 595 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 TBC1D2Q9BYX2 928 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 NCOA5Q9HCD5 579 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 SAGE1Q9NXZ1 904 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 HPS5Q9UPZ3 1129 aa10.14□□□□□ -0.79
CLTCL1-204ENST00000458188 hCG_1642624A0A1W2PR95 340 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 GOLGA8AA7E2F4 631 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 FLOT1O75955 427 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 PLEKHA8P1O95397 391 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 PARP1P09874 1014 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 CDC27P30260 824 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 ZNF543Q08ER8 600 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 GRM4Q14833 912 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 ME3Q16798 604 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 HABP4Q5JVS0 413 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 CATSPERGQ6ZRH7 1159 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 SGMS1Q86VZ5 419 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 IFNL1Q8IU54 200 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 FANCBQ8NB91 859 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 C12orf42Q96LP6 360 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 MTA3Q9BTC8 594 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 AGXT2Q9BYV1 514 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 ALDH8A1Q9H2A2 487 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 MAD2L2Q9UI95 211 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
CLTCL1-204ENST00000458188 TESPA1A2RU30 521 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 KLRF2D3W0D1 207 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 WDR46O15213 610 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 DHX16O60231 1041 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 ST18O60284 1047 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 TRPA1O75762 1119 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 DDAH1O94760 285 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 SNHG28P0DPA3 235 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 TAL1P17542 331 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 TM4SF4P48230 202 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 METAP2P50579 478 aaKnown RBP eCLIP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 SCRN1Q12765 414 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms