RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PDHBP11177 359 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 BMP3P12645 472 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 MCCP23508 829 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 DSG3P32926 999 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-215ENST00000457039 COG2Q14746 738 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 PNMA1Q8ND90 353 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 GTF3C2Q8WUA4 911 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-215ENST00000457039 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-215ENST00000457039 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 FBXO28Q9NVF7 368 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 ADAMTS5Q9UNA0 930 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 WDR19Q8NEZ3 1342 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 A0A0G2JMZ2 1700 aa16.59■□□□□ 0.25
SMPD4-215ENST00000457039 SH2B2O14492 632 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-215ENST00000457039 CNMDO75829 334 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 FLOT1O75955 427 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 SLC1A4P43007 532 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 WTAPQ15007 396 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 SART3Q15020 963 aaKnown RBP16.58■□□□□ 0.24
SMPD4-215ENST00000457039 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
SMPD4-215ENST00000457039 DHX32Q7L7V1 743 aaKnown RBP16.58■□□□□ 0.24
SMPD4-215ENST00000457039 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 TMEM87BQ96K49 555 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
SMPD4-215ENST00000457039 KAT14Q9H8E8 782 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 TXNRD2Q9NNW7 524 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-215ENST00000457039 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 RBPJLQ9UBG7 517 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 MORF4L1Q9UBU8 362 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 PPP1R9AQ9ULJ8 1098 aa16.58■□□□□ 0.24
SMPD4-215ENST00000457039 ERICH2A1L162 156 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 PLA2G6O60733 806 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 FKTNO75072 461 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 HMGB1P09429 215 aaKnown RBP16.57■□□□□ 0.24
SMPD4-215ENST00000457039 LIFRP42702 1097 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 CAP1Q01518 475 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 SP3Q02447 781 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 PRDM10Q9NQV6 1147 aa16.57■□□□□ 0.24
SMPD4-215ENST00000457039 PEX10O60683 326 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 CPA1P15085 419 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 ANAPC15P60006 121 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 ZNF543Q08ER8 600 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 ATG4CQ96DT6 458 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 SLF1Q9BQI6 1058 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 TM6SF1Q9BZW5 370 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 MTMR7Q9Y216 660 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
SMPD4-215ENST00000457039 TMEM232C9JQI7 657 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 PSMA5P28066 241 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 LACTBP83111 547 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-215ENST00000457039 TROAPQ12815 778 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 Q3C1V9 767 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 PRPF38AQ8NAV1 312 aaKnown RBP16.55■□□□□ 0.24
SMPD4-215ENST00000457039 REPS2Q8NFH8 660 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 BTBD7Q9P203 1132 aa16.55■□□□□ 0.24
SMPD4-215ENST00000457039 FRMPD2Q68DX3 1309 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-215ENST00000457039 VWA5AO00534 786 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 CTGFP29279 349 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 STAT2P52630 851 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 ERVK-9P63128 1117 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 ERVK-24P63145 666 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 CCDC96Q2M329 555 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 TMTC2Q8N394 836 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 MB21D1Q8N884 522 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 GPRC5AQ8NFJ5 357 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 ERO1AQ96HE7 468 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
SMPD4-215ENST00000457039 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
SMPD4-215ENST00000457039 TMEM132BQ14DG7 1078 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 GPATCH4Q5T3I0 446 aaKnown RBP16.53■□□□□ 0.24
SMPD4-215ENST00000457039 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 PAGR1Q9BTK6 254 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 SLC38A10Q9HBR0 1119 aa16.53■□□□□ 0.24
SMPD4-215ENST00000457039 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-215ENST00000457039 DDAH1O94760 285 aa16.52■□□□□ 0.24
SMPD4-215ENST00000457039 GOLGA8HP0CJ92 632 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms