RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 CCDC17Q96LX7 622 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 NUP88Q99567 741 aaPredicted RBP15.48■□□□□ 0.07
TREX1-203ENST00000456089 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
TREX1-203ENST00000456089 EPB41L4AQ9HCS5 686 aaPredicted RBP15.48■□□□□ 0.07
TREX1-203ENST00000456089 LAMA3Q16787 3333 aa15.48■□□□□ 0.07
TREX1-203ENST00000456089 WDR46O15213 610 aaKnown RBP15.47■□□□□ 0.07
TREX1-203ENST00000456089 RNF113AO15541 343 aaKnown RBP15.47■□□□□ 0.07
TREX1-203ENST00000456089 MX1P20591 662 aa15.47■□□□□ 0.07
TREX1-203ENST00000456089 MAGEA10P43363 369 aaPredicted RBP15.47■□□□□ 0.07
TREX1-203ENST00000456089 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
TREX1-203ENST00000456089 PRAMEF19Q5SWL8 479 aa15.47■□□□□ 0.07
TREX1-203ENST00000456089 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
TREX1-203ENST00000456089 SEC62Q99442 399 aaKnown RBP15.47■□□□□ 0.07
TREX1-203ENST00000456089 GDF15Q99988 308 aa15.47■□□□□ 0.07
TREX1-203ENST00000456089 SH2D4AQ9H788 454 aa15.47■□□□□ 0.07
TREX1-203ENST00000456089 ARPP21Q9UBL0 812 aaPredicted RBP15.47■□□□□ 0.07
TREX1-203ENST00000456089 DDX20Q9UHI6 824 aaKnown RBP15.47■□□□□ 0.07
TREX1-203ENST00000456089 MCM3APO60318 1980 aa15.46■□□□□ 0.07
TREX1-203ENST00000456089 CYBAP13498 195 aa15.46■□□□□ 0.07
TREX1-203ENST00000456089 RASA1P20936 1047 aa15.46■□□□□ 0.07
TREX1-203ENST00000456089 ATN1P54259 1190 aaPredicted RBP15.46■□□□□ 0.07
TREX1-203ENST00000456089 APPBP2Q92624 585 aa15.46■□□□□ 0.07
TREX1-203ENST00000456089 SENP6Q9GZR1 1112 aaPredicted RBP15.46■□□□□ 0.07
TREX1-203ENST00000456089 KANSL2Q9H9L4 492 aa15.46■□□□□ 0.07
TREX1-203ENST00000456089 GPAA1O43292 621 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 PRDM1O75626 825 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 IGHA2P01877 340 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
TREX1-203ENST00000456089 APPP05067 770 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 PGK2P07205 417 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
TREX1-203ENST00000456089 GJC2Q5T442 439 aaPredicted RBP15.45■□□□□ 0.06
TREX1-203ENST00000456089 B4GALNT3Q6L9W6 998 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 MB21D1Q8N884 522 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 SHCBP1Q8NEM2 672 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 MKNK2Q9HBH9 465 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 GOPCQ9HD26 462 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 LTBP2Q14767 1821 aa15.45■□□□□ 0.06
TREX1-203ENST00000456089 STRNO43815 780 aa15.44■□□□□ 0.06
TREX1-203ENST00000456089 TDO2P48775 406 aa15.44■□□□□ 0.06
TREX1-203ENST00000456089 SBK1Q52WX2 424 aa15.44■□□□□ 0.06
TREX1-203ENST00000456089 CHMP4CQ96CF2 233 aa15.44■□□□□ 0.06
TREX1-203ENST00000456089 FSD1Q9BTV5 496 aa15.44■□□□□ 0.06
TREX1-203ENST00000456089 MROH8Q9H579 483 aa15.44■□□□□ 0.06
TREX1-203ENST00000456089 SLC4A3P48751 1232 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 MDM2Q00987 491 aaPredicted RBP15.43■□□□□ 0.06
TREX1-203ENST00000456089 OLFML2BQ68BL8 750 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 MAML3Q96JK9 1138 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 PPP1R9AQ9ULJ8 1098 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 ROBO3Q96MS0 1386 aa15.43■□□□□ 0.06
TREX1-203ENST00000456089 A0A1W2PPC1 479 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 VWA5AO00534 786 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 FCER1AP12319 257 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 BMP8BP34820 402 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 MMP19Q99542 508 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 UBE2OQ9C0C9 1292 aaKnown RBP15.42■□□□□ 0.06
TREX1-203ENST00000456089 CLIP2Q9UDT6 1046 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 ADAMTS5Q9UNA0 930 aa15.42■□□□□ 0.06
TREX1-203ENST00000456089 NDUFB10O96000 172 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 TAL1P17542 331 aaPredicted RBP15.41■□□□□ 0.06
TREX1-203ENST00000456089 STAT3P40763 770 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 IRX6P78412 446 aaPredicted RBP15.41■□□□□ 0.06
TREX1-203ENST00000456089 GIMAP6Q6P9H5 292 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 CCDC129Q6ZRS4 1044 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 RIOX2Q8IUF8 465 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 LRRC47Q8N1G4 583 aaKnown RBP15.41■□□□□ 0.06
TREX1-203ENST00000456089 CEP95Q96GE4 821 aa15.41■□□□□ 0.06
TREX1-203ENST00000456089 ZNF214Q9UL59 606 aaPredicted RBP15.41■□□□□ 0.06
TREX1-203ENST00000456089 IGKV6D-41A0A0C4DH26 115 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 F5H6K3 240 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 DNM1LO00429 736 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 SEPT4O43236 478 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 MSCO60682 206 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 SLC25A27O95847 323 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 GNAT2P19087 354 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 PDE1AP54750 535 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 RTP1P59025 263 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 KLRC3Q07444 240 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 FAM47AQ5JRC9 791 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 CHD1LQ86WJ1 897 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 SMC5Q8IY18 1101 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 ABRAQ8N0Z2 381 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 FERMT2Q96AC1 680 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 LENG1Q96BZ8 264 aaPredicted RBP15.4■□□□□ 0.06
TREX1-203ENST00000456089 EVI5LQ96CN4 794 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 SLF1Q9BQI6 1058 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 SLC5A4Q9NY91 659 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 NYAP2Q9P242 653 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 ATP11BQ9Y2G3 1177 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 RIPK3Q9Y572 518 aa15.4■□□□□ 0.06
TREX1-203ENST00000456089 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 PATL2C9JE40 543 aaKnown RBP15.39■□□□□ 0.05
TREX1-203ENST00000456089 IGHDP01880 384 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 ZMYM1Q5SVZ6 1142 aa15.39■□□□□ 0.05
TREX1-203ENST00000456089 SNRNP48Q6IEG0 339 aaKnown RBP15.39■□□□□ 0.05
TREX1-203ENST00000456089 Q7L0L9 218 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms