RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
SEC16A-207ENST00000453963 CCDC62Q6P9F0 684 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 EFCAB13Q8IY85 973 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 ARHGEF2Q92974 986 aaKnown RBP13.3□□□□□ -0.28
SEC16A-207ENST00000453963 GSDMAQ96QA5 445 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 DPCR1Q3MIW9 517 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 SEC31AO94979 1220 aaKnown RBP13.3□□□□□ -0.28
SEC16A-207ENST00000453963 RNF10Q8N5U6 811 aaKnown RBP13.3□□□□□ -0.28
SEC16A-207ENST00000453963 FNBP1Q96RU3 617 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 GJA3Q9Y6H8 435 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 SYNMO15061 1565 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 KCNQ3O43525 872 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 ZNF131P52739 623 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 CALCRLQ16602 461 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 SLC35F6Q8N357 371 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 NSUN7Q8NE18 718 aaKnown RBP13.3□□□□□ -0.28
SEC16A-207ENST00000453963 PDLIM2Q96JY6 352 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 CFAP57Q96MR6 1250 aa13.3□□□□□ -0.28
SEC16A-207ENST00000453963 BCRP11274 1271 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 ATP1A2P50993 1020 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 CLCN6P51797 869 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 ADCY7P51828 1080 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 BTBD18B2RXH4 712 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 KRT5P13647 590 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 BIRC3Q13489 604 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 UAP1Q16222 522 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 CLIC6Q96NY7 704 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 NT5C3AQ9H0P0 336 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 GPCPD1Q9NPB8 672 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 AATFQ9NY61 560 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 TMEM94Q12767 1356 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 GAS8O95995 478 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 CCT5P48643 541 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 COPRSQ9NQ92 184 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 A0A087WUV0 522 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 FGAP02671 866 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 SMTNP53814 917 aa13.29□□□□□ -0.28
SEC16A-207ENST00000453963 MRPS9P82933 396 aaKnown RBP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 MAK16Q9BXY0 300 aaKnown RBP13.29□□□□□ -0.28
SEC16A-207ENST00000453963 KCNK3O14649 394 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 CASP14P31944 242 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 SEPT6Q14141 434 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 VPS52Q8N1B4 723 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 KLHL14Q9P2G3 628 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 MYOM2P54296 1465 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEC16A-207ENST00000453963 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 TBC1D22AQ8WUA7 517 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 KRIT1O00522 736 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 HIP1RO75146 1068 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 STX2P32856 288 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 PPARAQ07869 468 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 TERF2Q15554 542 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 SARM1Q6SZW1 724 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 PHLDB2Q86SQ0 1253 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 LINC00301Q8NCQ3 95 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 ARHGEF10LQ9HCE6 1279 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 AGTPBP1Q9UPW5 1226 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 KRT15P19012 456 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 PSMC4P43686 418 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 SIRT2Q8IXJ6 389 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 REXO1Q8N1G1 1221 aaKnown RBP13.28□□□□□ -0.28
SEC16A-207ENST00000453963 MICAL1Q8TDZ2 1067 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 EXOC7Q9UPT5 735 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 METP08581 1390 aa13.28□□□□□ -0.28
SEC16A-207ENST00000453963 ARHGEF5Q12774 1597 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 APBA3O96018 575 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 STAT1P42224 750 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 SP4Q02446 784 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 ANKRD20A3Q5VUR7 823 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 NELFCDQ8IXH7 590 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 RAB3IPQ96QF0 476 aaPredicted RBP13.27□□□□□ -0.28
SEC16A-207ENST00000453963 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.28
SEC16A-207ENST00000453963 LSM14BQ9BX40 385 aaKnown RBP13.27□□□□□ -0.28
SEC16A-207ENST00000453963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.282e-8■□□□□ 10.1
SEC16A-207ENST00000453963 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 FAN1Q9Y2M0 1017 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 MAGI3Q5TCQ9 1506 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 CARMIL3Q8ND23 1372 aa13.27□□□□□ -0.28
SEC16A-207ENST00000453963 DKC1O60832 514 aaKnown RBP eCLIP13.27□□□□□ -0.29
SEC16A-207ENST00000453963 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.29
SEC16A-207ENST00000453963 BLIDQ8IZY5 108 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 TTC16Q8NEE8 873 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 PARD6BQ9BYG5 372 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 hCG_1642624A0A1W2PR95 340 aa13.27□□□□□ -0.29
SEC16A-207ENST00000453963 HGSO14964 777 aaPredicted RBP13.27□□□□□ -0.29
SEC16A-207ENST00000453963 RPN1P04843 607 aaKnown RBP13.27□□□□□ -0.29
SEC16A-207ENST00000453963 CYP21A2P08686 494 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms