RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MYH6P13533 1939 aa18.27■□□□□ 0.52
SNX17-204ENST00000453453 CTNND1O60716 968 aaKnown RBP18.27■□□□□ 0.51
SNX17-204ENST00000453453 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.51
SNX17-204ENST00000453453 CTDNEP1O95476 244 aa18.27■□□□□ 0.51
SNX17-204ENST00000453453 EEF2P13639 858 aaKnown RBP18.27■□□□□ 0.51
SNX17-204ENST00000453453 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.51
SNX17-204ENST00000453453 NF2P35240 595 aa18.27■□□□□ 0.51
SNX17-204ENST00000453453 SSRP1Q08945 709 aaKnown RBP18.27■□□□□ 0.51
SNX17-204ENST00000453453 GRM4Q14833 912 aa18.27■□□□□ 0.51
SNX17-204ENST00000453453 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.51
SNX17-204ENST00000453453 LRRC47Q8N1G4 583 aaKnown RBP18.27■□□□□ 0.51
SNX17-204ENST00000453453 DDX11Q96FC9 970 aa18.27■□□□□ 0.51
SNX17-204ENST00000453453 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.51
SNX17-204ENST00000453453 POTECB2RU33 542 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 ADM5C9JUS6 153 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 PARP1P09874 1014 aaKnown RBP18.26■□□□□ 0.51
SNX17-204ENST00000453453 IFNAR1P17181 557 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 AKAP17AQ02040 695 aaKnown RBP18.26■□□□□ 0.51
SNX17-204ENST00000453453 RRP1BQ14684 758 aaKnown RBP18.26■□□□□ 0.51
SNX17-204ENST00000453453 SYCP1Q15431 976 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 MKL1Q969V6 931 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 LZTS2Q9BRK4 669 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 SH2D4AQ9H788 454 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 FAM217BQ9NTX9 383 aaPredicted RBP18.26■□□□□ 0.51
SNX17-204ENST00000453453 SYNPO2Q9UMS6 1093 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 STK36Q9NRP7 1315 aa18.26■□□□□ 0.51
SNX17-204ENST00000453453 UTRNP46939 3433 aa18.25■□□□□ 0.51
SNX17-204ENST00000453453 PHF20L1A8MW92 1017 aa18.25■□□□□ 0.51
SNX17-204ENST00000453453 GUCY1A2P33402 732 aa18.25■□□□□ 0.51
SNX17-204ENST00000453453 FOXD4L5Q5VV16 416 aaPredicted RBP18.25■□□□□ 0.51
SNX17-204ENST00000453453 PRAMEF18Q5VWM3 479 aa18.25■□□□□ 0.51
SNX17-204ENST00000453453 LARP1BQ659C4 914 aaKnown RBP18.25■□□□□ 0.51
SNX17-204ENST00000453453 FOXD4L4Q8WXT5 416 aaPredicted RBP18.25■□□□□ 0.51
SNX17-204ENST00000453453 WASF1Q92558 559 aa18.25■□□□□ 0.51
SNX17-204ENST00000453453 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
SNX17-204ENST00000453453 STX6O43752 255 aa18.24■□□□□ 0.51
SNX17-204ENST00000453453 F13A1P00488 732 aa18.24■□□□□ 0.51
SNX17-204ENST00000453453 NTRK3Q16288 839 aa18.24■□□□□ 0.51
SNX17-204ENST00000453453 SHROOM1Q2M3G4 852 aaPredicted RBP18.24■□□□□ 0.51
SNX17-204ENST00000453453 TMTC3Q6ZXV5 915 aa18.24■□□□□ 0.51
SNX17-204ENST00000453453 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
SNX17-204ENST00000453453 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
SNX17-204ENST00000453453 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 CHAMP1Q96JM3 812 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 WRNIP1Q96S55 665 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 SLC26A6Q9BXS9 759 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 ZNF112Q9UJU3 913 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 SSC5DA1L4H1 1573 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 H3BQV1 296 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 RAD21O60216 631 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 PPP1R12BO60237 982 aaPredicted RBP18.23■□□□□ 0.51
SNX17-204ENST00000453453 SYT1P21579 422 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 JAG1P78504 1218 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 KIAA1524Q8TCG1 905 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 PHKBQ93100 1093 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
SNX17-204ENST00000453453 GOPCQ9HD26 462 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 PICK1Q9NRD5 415 aa18.23■□□□□ 0.51
SNX17-204ENST00000453453 DTNBO60941 627 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 PLEKHA8P1O95397 391 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 PDHBP11177 359 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 CCDC96Q2M329 555 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 ZNF710Q8N1W2 664 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 DCAF4Q8WV16 495 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 CDCA5Q96FF9 252 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 MAD2L2Q9UI95 211 aa18.22■□□□□ 0.51
SNX17-204ENST00000453453 VPS37CA5D8V6 355 aaPredicted RBP18.21■□□□□ 0.51
SNX17-204ENST00000453453 PALM3A6NDB9 673 aaPredicted RBP18.21■□□□□ 0.51
SNX17-204ENST00000453453 USP17L5A8MUK1 530 aa18.21■□□□□ 0.51
SNX17-204ENST00000453453 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
SNX17-204ENST00000453453 DEXIO95424 95 aa18.21■□□□□ 0.51
SNX17-204ENST00000453453 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
SNX17-204ENST00000453453 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
SNX17-204ENST00000453453 CCDC82Q8N4S0 544 aa18.21■□□□□ 0.51
SNX17-204ENST00000453453 CNTNAP5Q8WYK1 1306 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 KLRF2D3W0D1 207 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 KIF20AO95235 890 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 SNHG28P0DPA3 235 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
SNX17-204ENST00000453453 INPP5BP32019 993 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
SNX17-204ENST00000453453 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 LDHDQ86WU2 507 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 CMTR1Q8N1G2 835 aaKnown RBP18.2■□□□□ 0.5
SNX17-204ENST00000453453 KLRG1Q96E93 195 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 C8orf76Q96K31 380 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 FEZ1Q99689 392 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 GLIS2Q9BZE0 524 aaPredicted RBP18.2■□□□□ 0.5
SNX17-204ENST00000453453 AS3MTQ9HBK9 375 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 ELP1O95163 1332 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 PRPF3O43395 683 aaKnown RBP18.2■□□□□ 0.5
SNX17-204ENST00000453453 SMARCA1P28370 1054 aa18.2■□□□□ 0.5
SNX17-204ENST00000453453 SLC1A4P43007 532 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms