RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 SENP2Q9HC62 589 aa18.38■□□□□ 0.53
RBM39-219ENST00000453310 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
RBM39-219ENST00000453310 PARP14Q460N5 1801 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 PDHBP11177 359 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 BMP3P12645 472 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 SLC1A4P43007 532 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
RBM39-219ENST00000453310 DCAF4Q8WV16 495 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 TM6SF1Q9BZW5 370 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 ADGRA2Q96PE1 1338 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 RLFQ13129 1914 aa18.37■□□□□ 0.53
RBM39-219ENST00000453310 TLR2O60603 784 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 FLOT1O75955 427 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 RPS6KB1P23443 525 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 HERVK_113P62684 666 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 P2RX7Q99572 595 aaKnown RBP18.36■□□□□ 0.53
RBM39-219ENST00000453310 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
RBM39-219ENST00000453310 ZSWIM6Q9HCJ5 1215 aa18.36■□□□□ 0.53
RBM39-219ENST00000453310 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
RBM39-219ENST00000453310 FOXN1O15353 648 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 SNHG28P0DPA3 235 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 LIFRP42702 1097 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 COG2Q14746 738 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 KCTD1Q719H9 257 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 RUFY3Q7L099 469 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 FBXO28Q9NVF7 368 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
RBM39-219ENST00000453310 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
RBM39-219ENST00000453310 MYPNQ86TC9 1320 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 SPDYE16A6NNV3 312 aaPredicted RBP18.34■□□□□ 0.53
RBM39-219ENST00000453310 GCLCP48506 637 aaPredicted RBP18.34■□□□□ 0.53
RBM39-219ENST00000453310 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 CATIPQ7Z7H3 387 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 TMTC2Q8N394 836 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 GTF3C2Q8WUA4 911 aaPredicted RBP18.34■□□□□ 0.53
RBM39-219ENST00000453310 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
RBM39-219ENST00000453310 CPA4Q9UI42 421 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 FEM1BQ9UK73 627 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 PPP1R9AQ9ULJ8 1098 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 A0A0G2JMZ2 1700 aa18.34■□□□□ 0.53
RBM39-219ENST00000453310 CCDC69A6NI79 296 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 HSPA8P11142 646 aaKnown RBP18.33■□□□□ 0.52
RBM39-219ENST00000453310 DSG3P32926 999 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 STAT2P52630 851 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 FGD1P98174 961 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 ZNF543Q08ER8 600 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
RBM39-219ENST00000453310 C17orf99Q6UX52 265 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 LBX2Q6XYB7 198 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 Q6ZUG5 572 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 SLF1Q9BQI6 1058 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 HOXC10Q9NYD6 342 aa18.33■□□□□ 0.52
RBM39-219ENST00000453310 TMEM232C9JQI7 657 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 GPR25O00155 361 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 BCRP11274 1271 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 CTCFP49711 727 aaPredicted RBP18.32■□□□□ 0.52
RBM39-219ENST00000453310 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
RBM39-219ENST00000453310 TROAPQ12815 778 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 IKQ13123 557 aaPredicted RBP18.32■□□□□ 0.52
RBM39-219ENST00000453310 NOM1Q5C9Z4 860 aaKnown RBP18.32■□□□□ 0.52
RBM39-219ENST00000453310 GPATCH4Q5T3I0 446 aaKnown RBP18.32■□□□□ 0.52
RBM39-219ENST00000453310 FAM160B2Q86V87 743 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 ANKRD13CQ8N6S4 541 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 ATG4CQ96DT6 458 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 GPCPD1Q9NPB8 672 aa18.32■□□□□ 0.52
RBM39-219ENST00000453310 PLA2G6O60733 806 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 DDAH1O94760 285 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 PARP1P09874 1014 aaKnown RBP18.31■□□□□ 0.52
RBM39-219ENST00000453310 FAM110CQ1W6H9 321 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 ASPRV1Q53RT3 343 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 TTBK2Q6IQ55 1244 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 POTEEQ6S8J3 1075 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 FBXL16Q8N461 479 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
RBM39-219ENST00000453310 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 MYL10Q9BUA6 226 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 AGXT2Q9BYV1 514 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 SLC12A7Q9Y666 1083 aa18.31■□□□□ 0.52
RBM39-219ENST00000453310 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
RBM39-219ENST00000453310 GOLGA8HP0CJ92 632 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 GRM4Q14833 912 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 MB21D1Q8N884 522 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 NUP133Q8WUM0 1156 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 BRF1Q92994 677 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 PDRG1Q9NUG6 133 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 ADAMTS5Q9UNA0 930 aa18.3■□□□□ 0.52
RBM39-219ENST00000453310 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms