RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 GNA11P29992 359 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 RPS6KA1Q15418 735 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 FANCBQ8NB91 859 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 SMCR8Q8TEV9 937 aaPredicted RBP8.6□□□□□ -1.03
RIF1-206ENST00000453091 LPIN2Q92539 896 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 EPSTI1Q96J88 318 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 NYXQ9GZU5 481 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 RNF40O75150 1001 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CYP2J2P51589 502 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 TRIM14Q14142 442 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 WHAMMP3Q1A5X7 153 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 ARFGAP2Q8N6H7 521 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CARMIL3Q8ND23 1372 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 SMCO2A6NFE2 343 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 IFNAR2P48551 515 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CTSWP56202 376 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 GUCY2DQ02846 1103 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 HS2ST1Q7LGA3 356 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 LINC00301Q8NCQ3 95 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 RSRC1Q96IZ7 334 aaKnown RBP8.6□□□□□ -1.03
RIF1-206ENST00000453091 POLD4Q9HCU8 107 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 APBA3O96018 575 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 PCK1P35558 622 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 PPP2R5DQ14738 602 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 OGFOD1Q8N543 542 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CCDC26Q8TAB7 109 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 HDAC9Q9UKV0 1011 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 RIPOR2Q9Y4F9 1068 aa8.6□□□□□ -1.03
RIF1-206ENST00000453091 CFBP00751 764 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 RPN1P04843 607 aaKnown RBP8.59□□□□□ -1.03
RIF1-206ENST00000453091 ZNF853P0CG23 659 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 ARL1P40616 181 aaPredicted RBP8.59□□□□□ -1.03
RIF1-206ENST00000453091 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 CCDC105Q8IYK2 499 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 MYCT1Q8N699 235 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 PPM1EQ8WY54 764 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 USP21Q9UK80 565 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 BACH1O14867 736 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 CCDC172P0C7W6 258 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 EHHADHQ08426 723 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 AXIN2Q9Y2T1 843 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 UTP11Q9Y3A2 253 aaKnown RBP8.59□□□□□ -1.03
RIF1-206ENST00000453091 GCNT3O95395 438 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 ADCY7P51828 1080 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 SETDB1Q15047 1291 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 BRD3Q15059 726 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 DYNLL2Q96FJ2 89 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 IL25Q9H293 177 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 PAK2Q13177 524 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 PTGDRQ13258 359 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 PEX26Q7Z412 305 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 SRGAP1Q7Z6B7 1085 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 DPF2Q92785 391 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 ZSCAN10Q96SZ4 725 aaPredicted RBP8.59□□□□□ -1.03
RIF1-206ENST00000453091 USP40Q9NVE5 1235 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 RTEL1Q9NZ71 1219 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 SLC16A2P36021 539 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 DPP8Q6V1X1 898 aaPredicted RBP8.59□□□□□ -1.03
RIF1-206ENST00000453091 CCDC170Q8IYT3 715 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 OR8K1Q8NGG5 319 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 NKIRAS1Q9NYS0 192 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 SHANK2Q9UPX8 1470 aa8.59□□□□□ -1.03
RIF1-206ENST00000453091 CLRN2A0PK11 232 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 SESN3P58005 492 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 CALCRLQ16602 461 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 VSIG1Q86XK7 387 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 ARHGEF2Q92974 986 aaKnown RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 CPVLQ9H3G5 476 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 SSH2Q76I76 1423 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 CETN3O15182 167 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 LACTBP83111 547 aaPredicted RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 VPS37BQ9H9H4 285 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 SOS2Q07890 1332 aaPredicted RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 KDM5CP41229 1560 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 SPATA1Q5VX52 437 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 NSMFQ6X4W1 530 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
RIF1-206ENST00000453091 ANKRD2Q9GZV1 360 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 PEX19P40855 299 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 LCORLQ8N3X6 602 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 FBXO18Q8NFZ0 1043 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 KIFC2Q96AC6 838 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 PIH1D3Q9NQM4 214 aaKnown RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 DNAJC17Q9NVM6 304 aaKnown RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 TRIM49BA6NDI0 452 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 THOC1Q96FV9 657 aaKnown RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 EPN1Q9Y6I3 576 aaPredicted RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 KIF24Q5T7B8 1368 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 PSDA5PKW4 1024 aaPredicted RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 SLCO1A2P46721 670 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 NECTIN1Q15223 517 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 CFAP221Q4G0U5 840 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 GPBP1Q86WP2 473 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
RIF1-206ENST00000453091 CDC23Q9UJX2 597 aa8.58□□□□□ -1.04
RIF1-206ENST00000453091 THRAP3Q9Y2W1 955 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms