RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 FOXP2O15409 715 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 GMCL1Q96IK5 515 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 VEZTQ9HBM0 779 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 RBPJLQ9UBG7 517 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 RPTORQ8N122 1335 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 TEX11Q8IYF3 940 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 SLC43A3Q8NBI5 491 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 ASCC2Q9H1I8 757 aaPredicted RBP9.33□□□□□ -0.92
CNOT4-207ENST00000451834 MROH8Q9H579 483 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
CNOT4-207ENST00000451834 TLR7Q9NYK1 1049 aaKnown RBP9.33□□□□□ -0.92
CNOT4-207ENST00000451834 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 KIAA1671Q9BY89 1806 aa9.33□□□□□ -0.92
CNOT4-207ENST00000451834 SLC25A27O95847 323 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 CYBAP13498 195 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 LHX8Q68G74 356 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 LNPKQ9C0E8 428 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 SH2D4AQ9H788 454 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 SNHG28P0DPA3 235 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 RIOX2Q8IUF8 465 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 KIF2CQ99661 725 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 ZNF408Q9H9D4 720 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 LMBRD1Q9NUN5 540 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 SERPINB13Q9UIV8 391 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 CEP350Q5VT06 3117 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 USP17L10C9JJH3 530 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 HLA-DOAP06340 250 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 PTPREP23469 700 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 GRK4P32298 578 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 NOLC1Q14978 699 aaKnown RBP eCLIP9.32□□□□□ -0.92
CNOT4-207ENST00000451834 LRIT3Q3SXY7 679 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 ZMYM1Q5SVZ6 1142 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 TREML2Q5T2D2 321 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
CNOT4-207ENST00000451834 DSG3P32926 999 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 UBXN2AP68543 259 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 CCSAPQ6IQ19 270 aaPredicted RBP9.31□□□□□ -0.92
CNOT4-207ENST00000451834 KATNBL1Q9H079 304 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 ZNF445P59923 1031 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 RBL2Q08999 1139 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 STRBPQ96SI9 672 aaKnown RBP9.31□□□□□ -0.92
CNOT4-207ENST00000451834 CRNKL1Q9BZJ0 848 aaKnown RBP9.31□□□□□ -0.92
CNOT4-207ENST00000451834 PAG1Q9NWQ8 432 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 RIOK3O14730 519 aaKnown RBP9.31□□□□□ -0.92
CNOT4-207ENST00000451834 ZNF792Q3KQV3 632 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 HS1BP3Q53T59 392 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 APPBP2Q92624 585 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 IL17RAQ96F46 866 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 ST7Q9NRC1 585 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 HELLSQ9NRZ9 838 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 PHF24Q9UPV7 400 aa9.31□□□□□ -0.92
CNOT4-207ENST00000451834 CCL5P13501 91 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 HERVK_113P62684 666 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 ERVK-24P63145 666 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 IRX3P78415 501 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 RASIP1Q5U651 963 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 GDF15Q99988 308 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 RWDD1Q9H446 243 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 NLRC5Q86WI3 1866 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 POTEFA5A3E0 1075 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 SPDYE16A6NNV3 312 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 LRRFIP1Q32MZ4 808 aaKnown RBP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 TRIM17Q9Y577 477 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 RAD50Q92878 1312 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 K7ELQ4 463 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 CHAF1AQ13111 956 aaPredicted RBP9.3□□□□□ -0.92
CNOT4-207ENST00000451834 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 LRRCC1Q9C099 1032 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 ECHDC1Q9NTX5 307 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 USP25Q9UHP3 1055 aa9.3□□□□□ -0.92
CNOT4-207ENST00000451834 MAGEB6P1A0A0J9YX57 407 aa9.29□□□□□ -0.92
CNOT4-207ENST00000451834 CLASRPQ8N2M8 674 aaKnown RBP9.29□□□□□ -0.92
CNOT4-207ENST00000451834 GPRC5AQ8NFJ5 357 aa9.29□□□□□ -0.92
CNOT4-207ENST00000451834 MAP3K14Q99558 947 aa9.29□□□□□ -0.92
CNOT4-207ENST00000451834 VCPKMTQ9H867 229 aa9.29□□□□□ -0.92
CNOT4-207ENST00000451834 WDR19Q8NEZ3 1342 aa9.29□□□□□ -0.92
CNOT4-207ENST00000451834 RGS2P41220 211 aa9.29□□□□□ -0.92
CNOT4-207ENST00000451834 DNM1LO00429 736 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 EPB41L2O43491 1005 aaKnown RBP9.28□□□□□ -0.92
CNOT4-207ENST00000451834 CCDC96Q2M329 555 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 KLHDC9Q8NEP7 349 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 NOL10Q9BSC4 688 aaKnown RBP9.28□□□□□ -0.92
CNOT4-207ENST00000451834 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.28□□□□□ -0.92
CNOT4-207ENST00000451834 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 GSG1L2A8MUP6 293 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 HOXD8P13378 290 aaPredicted RBP9.28□□□□□ -0.92
CNOT4-207ENST00000451834 PSMC4P43686 418 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 CTR9Q6PD62 1173 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 HTATIP2Q9BUP3 242 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 MAP3K20Q9NYL2 800 aaKnown RBP9.28□□□□□ -0.92
CNOT4-207ENST00000451834 SURF6O75683 361 aaKnown RBP9.28□□□□□ -0.92
CNOT4-207ENST00000451834 SLFN14P0C7P3 912 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 VCAM1P19320 739 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 NEDD1Q8NHV4 660 aa9.28□□□□□ -0.92
CNOT4-207ENST00000451834 MTMR8Q96EF0 704 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms