RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 PLS1Q14651 629 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 IER5LQ5T953 404 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 STK11IPQ8N1F8 1099 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 ATG4CQ96DT6 458 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 IVNS1ABPQ9Y6Y0 642 aa12.29□□□□□ -0.44
LINC01004-202ENST00000450686 ZNF236Q9UL36 1845 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 DLL1O00548 723 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
LINC01004-202ENST00000450686 IFIT2P09913 472 aaKnown RBP12.28□□□□□ -0.44
LINC01004-202ENST00000450686 C7P10643 843 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 CYBAP13498 195 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 CAPN2P17655 700 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 ERCC3P19447 782 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 SPATC1LQ9H0A9 340 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 FBXO28Q9NVF7 368 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 VCANP13611 3396 aa12.28□□□□□ -0.44
LINC01004-202ENST00000450686 ADD2P35612 726 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 RTP1P59025 263 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 COG2Q14746 738 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
LINC01004-202ENST00000450686 C20orf194Q5TEA3 1177 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 DPP9Q86TI2 863 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 NCAPG2Q86XI2 1143 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 CERS3Q8IU89 383 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 CLASRPQ8N2M8 674 aaKnown RBP12.27□□□□□ -0.45
LINC01004-202ENST00000450686 FERMT2Q96AC1 680 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 LENG1Q96BZ8 264 aaPredicted RBP12.27□□□□□ -0.45
LINC01004-202ENST00000450686 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 ATP11BQ9Y2G3 1177 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.45
LINC01004-202ENST00000450686 STK25O00506 426 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 RAD21O60216 631 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 FLOT1O75955 427 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 IGHA2P01877 340 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 HOXC6P09630 235 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 ICA1Q05084 483 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 LRIT3Q3SXY7 679 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 TMEM179Q6ZVK1 233 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 LPAR1Q92633 364 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 METRNQ9UJH8 293 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 ZBED9Q6R2W3 1325 aa12.26□□□□□ -0.45
LINC01004-202ENST00000450686 USP17L12C9JPN9 530 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 USP17L21D6R901 530 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 IGSF3O75054 1194 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 PGK2P07205 417 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 TAL1P17542 331 aaPredicted RBP12.25□□□□□ -0.45
LINC01004-202ENST00000450686 CDK8P49336 464 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 TMEM132BQ14DG7 1078 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
LINC01004-202ENST00000450686 HS6ST3Q8IZP7 471 aa12.25□□□□□ -0.45
LINC01004-202ENST00000450686 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
LINC01004-202ENST00000450686 PUS7LQ9H0K6 701 aaKnown RBP12.25□□□□□ -0.45
LINC01004-202ENST00000450686 PRDM5Q9NQX1 630 aaPredicted RBP12.25□□□□□ -0.45
LINC01004-202ENST00000450686 DNM1LO00429 736 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
LINC01004-202ENST00000450686 ADCYAP1R1P41586 468 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 C9orf50Q5SZB4 431 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 C12orf60Q5U649 245 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 SH3RF1Q7Z6J0 888 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC01004-202ENST00000450686 VCPKMTQ9H867 229 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
LINC01004-202ENST00000450686 ATP5JP18859 108 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 FAM83BQ5T0W9 1011 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 OLFML2BQ68BL8 750 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 CTR9Q6PD62 1173 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 MAML3Q96JK9 1138 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 GUCD1Q96NT3 240 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 HAUS7Q99871 368 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 LBHD1Q9BQE6 289 aaPredicted RBP12.23□□□□□ -0.45
LINC01004-202ENST00000450686 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC01004-202ENST00000450686 ARHGEF10LQ9HCE6 1279 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 HOXC10Q9NYD6 342 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 SWAP70Q9UH65 585 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 TMX2Q9Y320 296 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 SPTBN5Q9NRC6 3674 aaKnown RBP12.23□□□□□ -0.45
LINC01004-202ENST00000450686 MCM3APO60318 1980 aa12.23□□□□□ -0.45
LINC01004-202ENST00000450686 GREB1LQ9C091 1923 aaPredicted RBP12.23□□□□□ -0.45
LINC01004-202ENST00000450686 HMMRO75330 724 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
LINC01004-202ENST00000450686 LRRC41Q15345 812 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 SHHQ15465 462 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 SLC39A5Q6ZMH5 540 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 C16orf86Q6ZW13 317 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
LINC01004-202ENST00000450686 SHCBP1Q8NEM2 672 aa12.22□□□□□ -0.45
LINC01004-202ENST00000450686 BADQ92934 168 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms