RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
SEM1-206ENST00000449279 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
SEM1-206ENST00000449279 GPCPD1Q9NPB8 672 aa11.56□□□□□ -0.56
SEM1-206ENST00000449279 TPCN1Q9ULQ1 816 aa11.56□□□□□ -0.56
SEM1-206ENST00000449279 NAP1L2Q9ULW6 460 aaPredicted RBP11.56□□□□□ -0.56
SEM1-206ENST00000449279 TESPA1A2RU30 521 aaPredicted RBP11.55□□□□□ -0.56
SEM1-206ENST00000449279 CCDC69A6NI79 296 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 GOLGA8BA8MQT2 603 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 C19orf81C9J6K1 198 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 SNHG28P0DPA3 235 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 TAL1P17542 331 aaPredicted RBP11.55□□□□□ -0.56
SEM1-206ENST00000449279 SLC16A2P36021 539 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 NT5C2P49902 561 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 GTF2A2P52657 109 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 FGD1P98174 961 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 STK3Q13188 491 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 GRM4Q14833 912 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 CCDC96Q2M329 555 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 SAMD1Q6SPF0 538 aaPredicted RBP11.55□□□□□ -0.56
SEM1-206ENST00000449279 NBPF11Q86T75 865 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 CMTR1Q8N1G2 835 aaKnown RBP11.55□□□□□ -0.56
SEM1-206ENST00000449279 NUP133Q8WUM0 1156 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 NCOA5Q9HCD5 579 aaKnown RBP11.55□□□□□ -0.56
SEM1-206ENST00000449279 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
SEM1-206ENST00000449279 LRRC37A2A6NM11 1700 aa11.55□□□□□ -0.56
SEM1-206ENST00000449279 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
SEM1-206ENST00000449279 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 PLEKHA8P1O95397 391 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 CYP2C8P10632 490 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 CETPP11597 493 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
SEM1-206ENST00000449279 CDC27P30260 824 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 SNAP25P60880 206 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 CCT2P78371 535 aaKnown RBP11.54□□□□□ -0.56
SEM1-206ENST00000449279 ZNF543Q08ER8 600 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 NOGQ13253 232 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 ME3Q16798 604 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 CCDC178Q5BJE1 867 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 FBXL16Q8N461 479 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 DNAJC5GQ8N7S2 189 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 NECAB1Q8N987 351 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
SEM1-206ENST00000449279 GMCL1Q96IK5 515 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 MTA3Q9BTC8 594 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 TANGO6Q9C0B7 1094 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 ALDH8A1Q9H2A2 487 aaPredicted RBP11.54□□□□□ -0.56
SEM1-206ENST00000449279 R3HDMLQ9H3Y0 253 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 MAD2L2Q9UI95 211 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 ISY1Q9ULR0 285 aaKnown RBP11.54□□□□□ -0.56
SEM1-206ENST00000449279 AGTPBP1Q9UPW5 1226 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 MYH7BA7E2Y1 1941 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 NID2Q14112 1375 aa11.54□□□□□ -0.56
SEM1-206ENST00000449279 GOLGA8AA7E2F4 631 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
SEM1-206ENST00000449279 ZBTB43O43298 467 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 DDAH1O94760 285 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 BMP3P12645 472 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 SLC1A4P43007 532 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 USP14P54578 494 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 EVCP57679 992 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 CATIPQ7Z7H3 387 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 DCAF4Q8WV16 495 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 LPAR1Q92633 364 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 ASCC2Q9H1I8 757 aaPredicted RBP11.53□□□□□ -0.56
SEM1-206ENST00000449279 SLC12A7Q9Y666 1083 aa11.53□□□□□ -0.56
SEM1-206ENST00000449279 KIAA1217Q5T5P2 1943 aa11.52□□□□□ -0.56
SEM1-206ENST00000449279 hCG_1642624A0A1W2PR95 340 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
SEM1-206ENST00000449279 SPDYE16A6NNV3 312 aaPredicted RBP11.52□□□□□ -0.57
SEM1-206ENST00000449279 PDHXO00330 501 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 CYTH3O43739 400 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 SCRN1Q12765 414 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 CATSPERGQ6ZRH7 1159 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 FASTKD5Q7L8L6 764 aaKnown RBP11.52□□□□□ -0.57
SEM1-206ENST00000449279 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 ATG4CQ96DT6 458 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 P2RX7Q99572 595 aaKnown RBP11.52□□□□□ -0.57
SEM1-206ENST00000449279 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 DOCK5Q9H7D0 1870 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 CEP350Q5VT06 3117 aa11.52□□□□□ -0.57
SEM1-206ENST00000449279 USP17L15C9J2P7 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L13C9JLJ4 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L11C9JVI0 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 KLRF2D3W0D1 207 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L18D6R9N7 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L22D6RA61 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L17D6RBQ6 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L19D6RCP7 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 USP17L20D6RJB6 530 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 FLOT1O75955 427 aa11.51□□□□□ -0.57
SEM1-206ENST00000449279 PARP1P09874 1014 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms