RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 GJB2P29033 226 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 FKBP1BP68106 108 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 DGKZQ13574 1117 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
TNF-208ENST00000449264 DCAF4Q8WV16 495 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 OTUD5Q96G74 571 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 WDR18Q9BV38 432 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 CPVLQ9H3G5 476 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
TNF-208ENST00000449264 ZNF543Q08ER8 600 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 NTRK3Q16288 839 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 SLC26A6Q9BXS9 759 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 KIAA1683Q9H0B3 1180 aa17.01■□□□□ 0.31
TNF-208ENST00000449264 CNTNAP5Q8WYK1 1306 aa17■□□□□ 0.31
TNF-208ENST00000449264 KLRF2D3W0D1 207 aa17■□□□□ 0.31
TNF-208ENST00000449264 IFNAR1P17181 557 aa17■□□□□ 0.31
TNF-208ENST00000449264 GNAQP50148 359 aa17■□□□□ 0.31
TNF-208ENST00000449264 BACE1P56817 501 aa17■□□□□ 0.31
TNF-208ENST00000449264 LDLRAD1Q5T700 205 aa17■□□□□ 0.31
TNF-208ENST00000449264 CST9Q5W186 159 aa17■□□□□ 0.31
TNF-208ENST00000449264 ERO1BQ86YB8 467 aa17■□□□□ 0.31
TNF-208ENST00000449264 SRBD1Q8N5C6 995 aaKnown RBP17■□□□□ 0.31
TNF-208ENST00000449264 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
TNF-208ENST00000449264 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
TNF-208ENST00000449264 GMCL1Q96IK5 515 aa17■□□□□ 0.31
TNF-208ENST00000449264 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 SPDYE5A6NIY4 337 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 TOMM70O94826 608 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 BMP3P12645 472 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 USP14P54578 494 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 HMGCS2P54868 508 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
TNF-208ENST00000449264 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
TNF-208ENST00000449264 FAM83BQ5T0W9 1011 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
TNF-208ENST00000449264 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 FAM184AQ8NB25 1140 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
TNF-208ENST00000449264 AFG3L2Q9Y4W6 797 aa16.99■□□□□ 0.31
TNF-208ENST00000449264 hCG_1642624A0A1W2PR95 340 aa16.98■□□□□ 0.31
TNF-208ENST00000449264 FOSBP53539 338 aa16.98■□□□□ 0.31
TNF-208ENST00000449264 PPATQ06203 517 aa16.98■□□□□ 0.31
TNF-208ENST00000449264 SSRP1Q08945 709 aaKnown RBP16.98■□□□□ 0.31
TNF-208ENST00000449264 RBM46Q8TBY0 533 aaKnown RBP16.98■□□□□ 0.31
TNF-208ENST00000449264 SLC10A4Q96EP9 437 aa16.98■□□□□ 0.31
TNF-208ENST00000449264 UBA5Q9GZZ9 404 aa16.98■□□□□ 0.31
TNF-208ENST00000449264 FMNL1O95466 1100 aaPredicted RBP16.97■□□□□ 0.31
TNF-208ENST00000449264 SLC16A2P36021 539 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 AKAP17AQ02040 695 aaKnown RBP16.97■□□□□ 0.31
TNF-208ENST00000449264 FUT2Q10981 343 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 LZTS2Q9BRK4 669 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
TNF-208ENST00000449264 EMILIN3Q9NT22 766 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 IRF6O14896 467 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 VCAM1P19320 739 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 HUNKP57058 714 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 PPIL2Q13356 520 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 SLC35G1Q2M3R5 365 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 SAMD1Q6SPF0 538 aaPredicted RBP16.97■□□□□ 0.31
TNF-208ENST00000449264 HOMER1Q86YM7 354 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 LPAR1Q92633 364 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
TNF-208ENST00000449264 VAT1LQ9HCJ6 419 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 TMOD4Q9NZQ9 345 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 LOC285556D6RIA3 1793 aa16.97■□□□□ 0.31
TNF-208ENST00000449264 STK36Q9NRP7 1315 aa16.96■□□□□ 0.31
TNF-208ENST00000449264 WDR46O15213 610 aaKnown RBP16.96■□□□□ 0.31
TNF-208ENST00000449264 CYTH3O43739 400 aa16.96■□□□□ 0.31
TNF-208ENST00000449264 FDPSP14324 419 aaKnown RBP16.96■□□□□ 0.31
TNF-208ENST00000449264 SPZ1Q9BXG8 430 aa16.96■□□□□ 0.31
TNF-208ENST00000449264 TANGO6Q9C0B7 1094 aa16.96■□□□□ 0.31
TNF-208ENST00000449264 KIF3AQ9Y496 699 aa16.96■□□□□ 0.31
TNF-208ENST00000449264 V9GY48 417 aaPredicted RBP16.96■□□□□ 0.31
TNF-208ENST00000449264 UNCXA6NJT0 531 aa16.95■□□□□ 0.3
TNF-208ENST00000449264 C19orf81C9J6K1 198 aa16.95■□□□□ 0.3
TNF-208ENST00000449264 STAT2P52630 851 aa16.95■□□□□ 0.3
TNF-208ENST00000449264 MKRN3Q13064 507 aaKnown RBP16.95■□□□□ 0.3
TNF-208ENST00000449264 AIFM3Q96NN9 605 aa16.95■□□□□ 0.3
TNF-208ENST00000449264 PARP14Q460N5 1801 aa16.95■□□□□ 0.3
TNF-208ENST00000449264 DEXIO95424 95 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 GJA5P36382 358 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 GADL1Q6ZQY3 521 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 ADGRF4Q8IZF3 695 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 ALG1Q9BT22 464 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 RPAP3Q9H6T3 665 aaPredicted RBP16.94■□□□□ 0.3
TNF-208ENST00000449264 PRPF3O43395 683 aaKnown RBP16.94■□□□□ 0.3
TNF-208ENST00000449264 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
TNF-208ENST00000449264 KIFC2Q96AC6 838 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
TNF-208ENST00000449264 WNK4Q96J92 1243 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 PIGSQ96S52 555 aa16.94■□□□□ 0.3
TNF-208ENST00000449264 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms