RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 LDLRAD1Q5T700 205 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 SPICE1Q8N0Z3 855 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 PHKBQ93100 1093 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 DDX11Q96FC9 970 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 GMCL1Q96IK5 515 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 CLMNQ96JQ2 1002 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 LZTS2Q9BRK4 669 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 KIAA1683Q9H0B3 1180 aa22.7■■□□□ 1.22
SGCE-207ENST00000447873 KLRF2D3W0D1 207 aa22.69■■□□□ 1.22
SGCE-207ENST00000447873 SSRP1Q08945 709 aaKnown RBP22.69■■□□□ 1.22
SGCE-207ENST00000447873 MTMR2Q13614 643 aa22.69■■□□□ 1.22
SGCE-207ENST00000447873 GPATCH4Q5T3I0 446 aaKnown RBP22.69■■□□□ 1.22
SGCE-207ENST00000447873 SRBD1Q8N5C6 995 aaKnown RBP22.69■■□□□ 1.22
SGCE-207ENST00000447873 SMC1BQ8NDV3 1235 aa22.69■■□□□ 1.22
SGCE-207ENST00000447873 GPCPD1Q9NPB8 672 aa22.69■■□□□ 1.22
SGCE-207ENST00000447873 TRIM75PA6NK02 468 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 USP14P54578 494 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 KCTD1Q719H9 257 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 ERO1BQ86YB8 467 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 TRIM22Q8IYM9 498 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 AFG3L2Q9Y4W6 797 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 MYH6P13533 1939 aa22.68■■□□□ 1.22
SGCE-207ENST00000447873 BMP3P12645 472 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 BACE1P56817 501 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 PPATQ06203 517 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 CST9Q5W186 159 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 FAM184AQ8NB25 1140 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 SLC26A6Q9BXS9 759 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 ORC3Q9UBD5 711 aaPredicted RBP22.67■■□□□ 1.22
SGCE-207ENST00000447873 BAZ2BQ9UIF8 2168 aaKnown RBP22.67■■□□□ 1.22
SGCE-207ENST00000447873 AKAP17AQ02040 695 aaKnown RBP22.67■■□□□ 1.22
SGCE-207ENST00000447873 KIAA1755Q5JYT7 1200 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 NBPF11Q86T75 865 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 LPAR1Q92633 364 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 SLC10A4Q96EP9 437 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 NUP88Q99567 741 aaPredicted RBP22.67■■□□□ 1.22
SGCE-207ENST00000447873 KIF3AQ9Y496 699 aa22.67■■□□□ 1.22
SGCE-207ENST00000447873 STK36Q9NRP7 1315 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 SPDYE5A6NIY4 337 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 C19orf81C9J6K1 198 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 TOMM70O94826 608 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 FMNL1O95466 1100 aaPredicted RBP22.66■■□□□ 1.22
SGCE-207ENST00000447873 FUT2Q10981 343 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 CNKSR2Q8WXI2 1034 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 OTUD5Q96G74 571 aa22.66■■□□□ 1.22
SGCE-207ENST00000447873 RNF26Q9BY78 433 aaPredicted RBP22.66■■□□□ 1.22
SGCE-207ENST00000447873 CNTNAP5Q8WYK1 1306 aa22.65■■□□□ 1.22
SGCE-207ENST00000447873 PASKQ96RG2 1323 aa22.65■■□□□ 1.22
SGCE-207ENST00000447873 FDPSP14324 419 aaKnown RBP22.65■■□□□ 1.22
SGCE-207ENST00000447873 SMARCA1P28370 1054 aa22.65■■□□□ 1.22
SGCE-207ENST00000447873 ZNF784Q8NCA9 323 aaPredicted RBP22.65■■□□□ 1.22
SGCE-207ENST00000447873 RBM46Q8TBY0 533 aaKnown RBP22.65■■□□□ 1.22
SGCE-207ENST00000447873 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
SGCE-207ENST00000447873 CPVLQ9H3G5 476 aa22.65■■□□□ 1.22
SGCE-207ENST00000447873 HMGCS2P54868 508 aa22.64■■□□□ 1.22
SGCE-207ENST00000447873 FAM83BQ5T0W9 1011 aa22.64■■□□□ 1.22
SGCE-207ENST00000447873 TTBK2Q6IQ55 1244 aa22.64■■□□□ 1.22
SGCE-207ENST00000447873 OPTNQ96CV9 577 aa22.64■■□□□ 1.22
SGCE-207ENST00000447873 SPZ1Q9BXG8 430 aa22.64■■□□□ 1.22
SGCE-207ENST00000447873 EMILIN3Q9NT22 766 aa22.64■■□□□ 1.22
SGCE-207ENST00000447873 V9GY48 417 aaPredicted RBP22.64■■□□□ 1.22
SGCE-207ENST00000447873 TMEM232C9JQI7 657 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 WDR46O15213 610 aaKnown RBP22.63■■□□□ 1.21
SGCE-207ENST00000447873 PRPF3O43395 683 aaKnown RBP22.63■■□□□ 1.21
SGCE-207ENST00000447873 IKQ13123 557 aaPredicted RBP22.63■■□□□ 1.21
SGCE-207ENST00000447873 PPIL2Q13356 520 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 TMOD4Q9NZQ9 345 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 PTPRFP10586 1907 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 IRF6O14896 467 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 CYTH3O43739 400 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 DEXIO95424 95 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 PDCP20941 246 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 DDIT3P35638 169 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 SLC16A2P36021 539 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 DGKZQ13574 1117 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 LARP1BQ659C4 914 aaKnown RBP22.63■■□□□ 1.21
SGCE-207ENST00000447873 PIBF1Q8WXW3 757 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 WASF1Q92558 559 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 VAT1LQ9HCJ6 419 aa22.63■■□□□ 1.21
SGCE-207ENST00000447873 RBM27Q9P2N5 1060 aaKnown RBP22.63■■□□□ 1.21
SGCE-207ENST00000447873 hCG_1642624A0A1W2PR95 340 aa22.62■■□□□ 1.21
SGCE-207ENST00000447873 SLC35G1Q2M3R5 365 aa22.62■■□□□ 1.21
SGCE-207ENST00000447873 C12orf42Q96LP6 360 aa22.62■■□□□ 1.21
SGCE-207ENST00000447873 RIOX1Q9H6W3 641 aa22.62■■□□□ 1.21
SGCE-207ENST00000447873 CXCL11O14625 94 aa22.61■■□□□ 1.21
SGCE-207ENST00000447873 VCAM1P19320 739 aa22.61■■□□□ 1.21
SGCE-207ENST00000447873 STAT2P52630 851 aa22.61■■□□□ 1.21
SGCE-207ENST00000447873 HUNKP57058 714 aa22.61■■□□□ 1.21
SGCE-207ENST00000447873 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
SGCE-207ENST00000447873 RRP36Q96EU6 259 aaKnown RBP22.61■■□□□ 1.21
SGCE-207ENST00000447873 CIZ1Q9ULV3 898 aaPredicted RBP22.61■■□□□ 1.21
SGCE-207ENST00000447873 SYT1P21579 422 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 ADGRF4Q8IZF3 695 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 CHURC1Q8WUH1 139 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 ALG1Q9BT22 464 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 TANGO6Q9C0B7 1094 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 SEC63Q9UGP8 760 aaKnown RBP22.6■■□□□ 1.21
SGCE-207ENST00000447873 FEM1BQ9UK73 627 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 KCNH4Q9UQ05 1017 aa22.6■■□□□ 1.21
SGCE-207ENST00000447873 BTNL9Q6UXG8 535 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms