RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 LRRC7Q96NW7 1537 aa7.8□□□□□ -1.16
CDK12-202ENST00000447079 DEPDC5O75140 1603 aa7.8□□□□□ -1.16
CDK12-202ENST00000447079 POLR2MP0CAP2 368 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 LONP1P36776 959 aaKnown RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 NCAPH2Q6IBW4 605 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 CFAP57Q96MR6 1250 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 SPATA31A3Q5VYP0 1347 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 SMCO2A6NFE2 343 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 TRIM37O94972 964 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 ARID5AQ03989 594 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 CCDC122Q5T0U0 273 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 PSTPIP2Q9H939 334 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 ATP2C2O75185 946 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 GCNT3O95395 438 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 HSPD1P10809 573 aaKnown RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 TXKP42681 527 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 CFAP58Q5T655 872 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 KLHDC4Q8TBB5 520 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 AFAP1L1Q8TED9 768 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 JPH2Q9BR39 696 aaPredicted RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 RTEL1Q9NZ71 1219 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 AGTPBP1Q9UPW5 1226 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.79□□□□□ -1.169e-6■□□□□ 8.4
CDK12-202ENST00000447079 RAPGEF1Q13905 1077 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 SULF1Q8IWU6 871 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 BIN2Q9UBW5 565 aaPredicted RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 TTLL1O95922 423 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 MYCLP12524 364 aaPredicted RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 NPR1P16066 1061 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 GCFC2P16383 781 aaKnown RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 LACTBP83111 547 aaPredicted RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 CABP7Q86V35 215 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 MYCT1Q8N699 235 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 RPGRIP1Q96KN7 1286 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 UTP11Q9Y3A2 253 aaKnown RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 RIOK3O14730 519 aaKnown RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 SCG2P13521 617 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 KIF11P52732 1056 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 PPP1R2P3Q6NXS1 205 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 DDX17Q92841 729 aaKnown RBP7.79□□□□□ -1.16
CDK12-202ENST00000447079 GUCA1BQ9UMX6 200 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 MYO3BQ8WXR4 1341 aa7.79□□□□□ -1.16
CDK12-202ENST00000447079 CCNA1P78396 465 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 SUPT20HL1Q3ZLR7 823 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 PNMA1Q8ND90 353 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 KRT27Q7Z3Y8 459 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 NEK8Q86SG6 692 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 LMNTD2Q8IXW0 634 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 KIFC2Q96AC6 838 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 CDHR1Q96JP9 859 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 RNF26Q9BY78 433 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 FOXP1Q9H334 677 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 CEP170BQ9Y4F5 1589 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 ZMYM1Q5SVZ6 1142 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 FANCBQ8NB91 859 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 NAPGQ99747 312 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 PXDNLA1KZ92 1463 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 ARHGEF28Q8N1W1 1705 aaKnown RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 KIF3CO14782 793 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 PPM1FP49593 454 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 PLCB3Q01970 1234 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 FAM160B1Q5W0V3 765 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 TTLL7Q6ZT98 887 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 RTKN2Q8IZC4 609 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 GOLGA6CA6NDK9 693 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 GOLGA6BA6NDN3 693 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 USP17L21D6R901 530 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 ARHGAP6O43182 974 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 CHMP2AO43633 222 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 GOLGA6DP0CG33 693 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 RBM6P78332 1123 aaKnown RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 TCP10Q12799 353 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 USH1GQ495M9 461 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 HERC4Q5GLZ8 1057 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 ZBTB8OSQ8IWT0 167 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 GOLGA6AQ9NYA3 693 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 CRB1P82279 1406 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 ZNF500O60304 480 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 ATF7P17544 494 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 ERCC5P28715 1186 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 ICA1Q05084 483 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 DMP1Q13316 513 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 ABCB5Q2M3G0 1257 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 LRCH2Q5VUJ6 765 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 FBXO11Q86XK2 927 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 NR1I2O75469 434 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 BTDP43251 543 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 SH3BGRP55822 239 aaPredicted RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 STX17P56962 302 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 PPP2R3AQ06190 1150 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 ZNF569Q5MCW4 686 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 NELFBQ8WX92 580 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 METTL14Q9HCE5 456 aaKnown RBP7.78□□□□□ -1.16
CDK12-202ENST00000447079 PARP2Q9UGN5 583 aa7.78□□□□□ -1.16
CDK12-202ENST00000447079 CFBP00751 764 aa7.77□□□□□ -1.16
CDK12-202ENST00000447079 ZNF853P0CG23 659 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms