RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.68□□□□□ -0.06
PRDM15-206ENST00000447016 PALM2Q8IXS6 379 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 PPP1R13BQ96KQ4 1090 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 YTHDC2Q9H6S0 1430 aaKnown RBP14.68□□□□□ -0.06
PRDM15-206ENST00000447016 CHMP2AO43633 222 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 GSPT1P15170 499 aaKnown RBP14.68□□□□□ -0.06
PRDM15-206ENST00000447016 EPHB4P54760 987 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 CCDC197Q8NCU1 140 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 HAUS2Q9NVX0 235 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 THEGQ9P2T0 379 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 RNF14Q9UBS8 474 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 PCDHA7Q9UN72 937 aa14.68□□□□□ -0.06
PRDM15-206ENST00000447016 EDC4Q6P2E9 1401 aaKnown RBP14.68□□□□□ -0.06
PRDM15-206ENST00000447016 CCT5P48643 541 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 ARHGAP4P98171 946 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 HVCN1Q96D96 273 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 KRT12Q99456 494 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 ARMCX3Q9UH62 379 aaPredicted RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 PYCARDQ9ULZ3 195 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 RBBP5Q15291 538 aaKnown RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 DDB1Q16531 1140 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 ZNF654Q8IZM8 581 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 FAM89AQ96GI7 184 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 MROH5Q6ZUA9 1318 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 HARSP12081 509 aaKnown RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 RETREG2Q8NC44 543 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 MYL10Q9BUA6 226 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 ATP8A2Q9NTI2 1148 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 PCDHB13Q9Y5F0 798 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 BZW2Q9Y6E2 419 aaKnown RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 ARHGAP42A6NI28 874 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 GCP02774 474 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 MAN1A1P33908 653 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 SLC12A2P55011 1212 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 SPATS2LQ9NUQ6 558 aaKnown RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 RTEL1Q9NZ71 1219 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 VPS54Q9P1Q0 977 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
PRDM15-206ENST00000447016 ZMYM6O95789 1325 aa14.67□□□□□ -0.06
PRDM15-206ENST00000447016 CLTAP09496 248 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 CTAGE3PQ8IX95 158 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 STAMQ92783 540 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 TEKT1Q969V4 418 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 GSDMAQ96QA5 445 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 MGEA5O60502 916 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 PRDM1O75626 825 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 CASC4Q6P4E1 433 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 ADCY8P40145 1251 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 BANK1Q8NDB2 785 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 RSAD2Q8WXG1 361 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 RAB20Q9NX57 234 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 TPCN1Q9ULQ1 816 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 OPHN1O60890 802 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 RASIP1Q5U651 963 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 RNF34Q969K3 372 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 HAUS7Q99871 368 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 WDR7Q9Y4E6 1490 aa14.66□□□□□ -0.06
PRDM15-206ENST00000447016 THAP12O43422 761 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 CEBPAP49715 358 aaPredicted RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 LRCH2Q5VUJ6 765 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 SPATA5Q8NB90 893 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 CFAP61Q8NHU2 1237 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 VTI1AQ96AJ9 217 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 SHANK2Q9UPX8 1470 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 CD19P15391 556 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 CTDSPL2Q05D32 466 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 DBN1Q16643 649 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 ARHGAP44Q17R89 818 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 TRIM68Q6AZZ1 485 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 KLHDC4Q8TBB5 520 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 DDX27Q96GQ7 796 aaKnown RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 SLC1A4P43007 532 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 RPAINQ86UA6 219 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 HAUS1Q96CS2 278 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 CUEDC2Q9H467 287 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 INTS9Q9NV88 658 aaKnown RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 ARPP21Q9UBL0 812 aaPredicted RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 COPB1P53618 953 aaKnown RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 IL9RQ01113 521 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 BLIDQ8IZY5 108 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 LRRC8CQ8TDW0 803 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 SPZ1Q9BXG8 430 aa14.65□□□□□ -0.06
PRDM15-206ENST00000447016 ACTR5Q9H9F9 607 aaPredicted RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 SAP30BPQ9UHR5 308 aaKnown RBP14.65□□□□□ -0.06
PRDM15-206ENST00000447016 LONP1P36776 959 aaKnown RBP14.64□□□□□ -0.07
PRDM15-206ENST00000447016 SP4Q02446 784 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 HADHQ16836 314 aaKnown RBP14.64□□□□□ -0.07
PRDM15-206ENST00000447016 MIER3Q7Z3K6 550 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 GSDMBQ8TAX9 411 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 TRIM4Q9C037 500 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 PPP6R2O75170 966 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 EEF1GP26641 437 aaKnown RBP14.64□□□□□ -0.07
PRDM15-206ENST00000447016 ZAP70P43403 619 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
PRDM15-206ENST00000447016 NSMCE1Q8WV22 266 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms