RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 COL11A1P12107 1806 aaPredicted RBP10.23□□□□□ -0.77
FXR1-203ENST00000445140 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 INHBEP58166 350 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 NTRK3Q16288 839 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 TMTC3Q6ZXV5 915 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 FASTKD5Q7L8L6 764 aaKnown RBP10.23□□□□□ -0.77
FXR1-203ENST00000445140 RASAL3Q86YV0 1011 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 RIOX1Q9H6W3 641 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
FXR1-203ENST00000445140 FEM1BQ9UK73 627 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 MYH15Q9Y2K3 1946 aa10.23□□□□□ -0.77
FXR1-203ENST00000445140 KLF18A0A0U1RQI7 1052 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 ATP2A1O14983 1001 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 APLP1P51693 650 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 GTF2A2P52657 109 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 OAZ1P54368 228 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 GHRHRQ02643 423 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
FXR1-203ENST00000445140 TRAF1Q13077 416 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 ANKRD23Q86SG2 305 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 FANCBQ8NB91 859 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 RNF26Q9BY78 433 aaPredicted RBP10.22□□□□□ -0.77
FXR1-203ENST00000445140 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 MAD2L2Q9UI95 211 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 NDUFB10O96000 172 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 HMGN5P82970 282 aaKnown RBP10.22□□□□□ -0.77
FXR1-203ENST00000445140 SNAPC2Q13487 334 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 RGMBQ6NW40 437 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 PPP1R18Q6NYC8 613 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 TMX3Q96JJ7 454 aa10.22□□□□□ -0.77
FXR1-203ENST00000445140 MANSC4A6NHS7 340 aaPredicted RBP10.21□□□□□ -0.77
FXR1-203ENST00000445140 FAM155AB1AL88 458 aaPredicted RBP10.21□□□□□ -0.77
FXR1-203ENST00000445140 NMT2O60551 498 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 ST3GAL1Q11201 340 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.772e-6■■■□□ 19.1
FXR1-203ENST00000445140 ME3Q16798 604 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 RTN1Q16799 776 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 CTCFLQ8NI51 663 aaPredicted RBP10.21□□□□□ -0.77
FXR1-203ENST00000445140 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 CNTNAP5Q8WYK1 1306 aa10.21□□□□□ -0.77
FXR1-203ENST00000445140 GOLGA8BA8MQT2 603 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 F5H6K3 240 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 MPHOSPH10O00566 681 aaKnown RBP10.21□□□□□ -0.78
FXR1-203ENST00000445140 ZMYND10O75800 440 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 CD2BP2O95400 341 aaKnown RBP10.21□□□□□ -0.78
FXR1-203ENST00000445140 PARP1P09874 1014 aaKnown RBP10.21□□□□□ -0.78
FXR1-203ENST00000445140 CETPP11597 493 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 CPA1P15085 419 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 KLRC3Q07444 240 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 SLFN13Q68D06 897 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 NBPF11Q86T75 865 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.78
FXR1-203ENST00000445140 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 SENP2Q9HC62 589 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 AGTPBP1Q9UPW5 1226 aa10.21□□□□□ -0.78
FXR1-203ENST00000445140 ADGRA2Q96PE1 1338 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 PRPF3O43395 683 aaKnown RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 COPB2P35606 906 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 GJA5P36382 358 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
FXR1-203ENST00000445140 APOBRQ0VD83 1088 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 PRAMEF18Q5VWM3 479 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 CPLX2Q6PUV4 134 aaKnown RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 MB21D1Q8N884 522 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 ACER1Q8TDN7 264 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 CHURC1Q8WUH1 139 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 OPTNQ96CV9 577 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 SLKQ9H2G2 1235 aaPredicted RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 SH3GLB2Q9NR46 395 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 GOLGA8AA7E2F4 631 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 SLURP2P0DP57 97 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 BMP3P12645 472 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 ANP32AP39687 249 aaKnown RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 SCRN1Q12765 414 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 SLC10A4Q96EP9 437 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
FXR1-203ENST00000445140 STX8Q9UNK0 236 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 ESYT2A0FGR8 921 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 VCAM1P19320 739 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 DDIT3P35638 169 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 TM4SF4P48230 202 aa10.2□□□□□ -0.78
FXR1-203ENST00000445140 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms