RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 AKNAD1Q5T1N1 836 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 MFSD6Q6ZSS7 791 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 ATG4CQ96DT6 458 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 SPATC1LQ9H0A9 340 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 IL17RBQ9NRM6 502 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 TOMM22Q9NS69 142 aa22.05■■□□□ 1.12
CCDC188-202ENST00000444532 MTFR1Q15390 333 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 SHCBP1Q8NEM2 672 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 STAG1Q8WVM7 1258 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 USP6NLQ92738 828 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 MOV10L1Q9BXT6 1211 aaKnown RBP22.04■■□□□ 1.12
CCDC188-202ENST00000444532 RNF41Q9H4P4 317 aaPredicted RBP22.04■■□□□ 1.12
CCDC188-202ENST00000444532 FBXO28Q9NVF7 368 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 CTNNA3Q9UI47 895 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 PPP1R9AQ9ULJ8 1098 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 RAD50Q92878 1312 aa22.04■■□□□ 1.12
CCDC188-202ENST00000444532 SLC15A5A6NIM6 579 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 INHAP05111 366 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 CCL5P13501 91 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 CYP2B6P20813 491 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 CHMLP26374 656 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 NT5C2P49902 561 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 RRP12Q5JTH9 1297 aaKnown RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 TRMT44Q8IYL2 757 aaKnown RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 LRRC47Q8N1G4 583 aaKnown RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 PRPF38AQ8NAV1 312 aaKnown RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 NUP88Q99567 741 aaPredicted RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 NBPF3Q9H094 633 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 STX8Q9UNK0 236 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 IVNS1ABPQ9Y6Y0 642 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 COL11A1P12107 1806 aaPredicted RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 LAMA4Q16363 1823 aa22.03■■□□□ 1.12
CCDC188-202ENST00000444532 KIAA0100Q14667 2235 aaKnown RBP22.03■■□□□ 1.12
CCDC188-202ENST00000444532 VWA5AO00534 786 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 STRNO43815 780 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 HMGCRP04035 888 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 EN2P19622 333 aaPredicted RBP22.02■■□□□ 1.12
CCDC188-202ENST00000444532 PTPREP23469 700 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 RGS2P41220 211 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 NOVP48745 357 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 WDR78Q5VTH9 848 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 SLFN13Q68D06 897 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 SAMD1Q6SPF0 538 aaPredicted RBP22.02■■□□□ 1.12
CCDC188-202ENST00000444532 SLF1Q9BQI6 1058 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 RNF208Q9H0X6 261 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 MROH8Q9H579 483 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 TCP11L1Q9NUJ3 509 aa22.02■■□□□ 1.12
CCDC188-202ENST00000444532 NMT2O60551 498 aa22.01■■□□□ 1.11
CCDC188-202ENST00000444532 MAP2K5Q13163 448 aa22.01■■□□□ 1.11
CCDC188-202ENST00000444532 PLS1Q14651 629 aa22.01■■□□□ 1.11
CCDC188-202ENST00000444532 TMEM132BQ14DG7 1078 aa22.01■■□□□ 1.11
CCDC188-202ENST00000444532 IMMTQ16891 758 aaKnown RBP22.01■■□□□ 1.11
CCDC188-202ENST00000444532 NKX2-3Q8TAU0 364 aa22.01■■□□□ 1.11
CCDC188-202ENST00000444532 FEM1BQ9UK73 627 aa22.01■■□□□ 1.11
CCDC188-202ENST00000444532 SLC25A27O95847 323 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 GJB1P08034 283 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 BMP3P12645 472 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 ERCC3P19447 782 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 GRB14Q14449 540 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 TBC1D10CQ8IV04 446 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 GMCL1Q96IK5 515 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 IL25Q9H293 177 aa22■■□□□ 1.11
CCDC188-202ENST00000444532 ESR2Q92731 530 aa21.99■■□□□ 1.11
CCDC188-202ENST00000444532 CCDC136Q96JN2 1154 aa21.99■■□□□ 1.11
CCDC188-202ENST00000444532 APBA2Q99767 749 aa21.99■■□□□ 1.11
CCDC188-202ENST00000444532 UNC93B1Q9H1C4 597 aa21.99■■□□□ 1.11
CCDC188-202ENST00000444532 TNRC18O15417 2968 aaPredicted RBP21.98■■□□□ 1.11
CCDC188-202ENST00000444532 NEFLP07196 543 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 HOXC6P09630 235 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 CAPN2P17655 700 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 COPB2P35606 906 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 STAT3P40763 770 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 GJA8P48165 433 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 RIOX2Q8IUF8 465 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 ABRAQ8N0Z2 381 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 REPS2Q8NFH8 660 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 TRIB2Q92519 343 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 TTC14Q96N46 770 aa21.98■■□□□ 1.11
CCDC188-202ENST00000444532 ZNF214Q9UL59 606 aaPredicted RBP21.98■■□□□ 1.11
CCDC188-202ENST00000444532 ZNF236Q9UL36 1845 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 SGSM2O43147 1006 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 ZBED4O75132 1171 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 FDX1P10109 184 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 TOP1P11387 765 aaKnown RBP21.97■■□□□ 1.11
CCDC188-202ENST00000444532 ZKSCAN1P17029 563 aaPredicted RBP21.97■■□□□ 1.11
CCDC188-202ENST00000444532 SLC1A4P43007 532 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 NCAPG2Q86XI2 1143 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 CHURC1Q8WUH1 139 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 RPTORQ8N122 1335 aa21.97■■□□□ 1.11
CCDC188-202ENST00000444532 ATP2A1O14983 1001 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 PLA2G6O60733 806 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 MCCP23508 829 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 STAT2P52630 851 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 RCSD1Q6JBY9 416 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 DPP9Q86TI2 863 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 KIFC2Q96AC6 838 aa21.96■■□□□ 1.11
CCDC188-202ENST00000444532 HMX1Q9NP08 348 aaPredicted RBP21.96■■□□□ 1.11
CCDC188-202ENST00000444532 PAK6Q9NQU5 681 aaPredicted RBP21.96■■□□□ 1.11
CCDC188-202ENST00000444532 CTDP1Q9Y5B0 961 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms