RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 LINC00116Q8NCU8 138 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 MINPP1Q9UNW1 487 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 DLEC1Q9Y238 1755 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 SOWAHDA6NJG2 315 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 LRRIQ3A6PVS8 624 aaPredicted RBP21.37■■□□□ 1.01
PMPCB-204ENST00000444457 ANKRD65E5RJM6 399 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 PHACTR2O75167 634 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 PSEN1P49768 467 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 FOXP4Q8IVH2 680 aaPredicted RBP21.37■■□□□ 1.01
PMPCB-204ENST00000444457 CEP89Q96ST8 783 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 RNF26Q9BY78 433 aaPredicted RBP21.37■■□□□ 1.01
PMPCB-204ENST00000444457 VIPAS39Q9H9C1 493 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 PCDHA5Q9Y5H7 936 aa21.37■■□□□ 1.01
PMPCB-204ENST00000444457 AARSP49588 968 aaKnown RBP eCLIP21.36■■□□□ 1.01
PMPCB-204ENST00000444457 DYNLL1P63167 89 aaKnown RBP21.36■■□□□ 1.01
PMPCB-204ENST00000444457 GRIN1Q05586 938 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 PPP2R5BQ15173 497 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 PCDHB6Q9Y5E3 794 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 RHOXF2BP0C7M4 288 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 ENAHQ8N8S7 591 aaPredicted RBP21.36■■□□□ 1.01
PMPCB-204ENST00000444457 OXER1Q8TDS5 423 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 FAM84BQ96KN1 310 aaPredicted RBP21.36■■□□□ 1.01
PMPCB-204ENST00000444457 RHOXF2Q9BQY4 288 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 BRIP1Q9BX63 1249 aa21.36■■□□□ 1.01
PMPCB-204ENST00000444457 NAA15Q9BXJ9 866 aaKnown RBP21.36■■□□□ 1.01
PMPCB-204ENST00000444457 MDM2Q00987 491 aaPredicted RBP21.35■■□□□ 1.01
PMPCB-204ENST00000444457 WDR93Q6P2C0 686 aa21.35■■□□□ 1.01
PMPCB-204ENST00000444457 RAD9BQ6WBX8 426 aa21.35■■□□□ 1.01
PMPCB-204ENST00000444457 CCDC91Q7Z6B0 441 aa21.35■■□□□ 1.01
PMPCB-204ENST00000444457 ZSCAN10Q96SZ4 725 aaPredicted RBP21.35■■□□□ 1.01
PMPCB-204ENST00000444457 FAM107BQ9H098 131 aa21.35■■□□□ 1.01
PMPCB-204ENST00000444457 CTAGE9A4FU28 777 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 AKR1B15C9JRZ8 316 aaPredicted RBP21.34■■□□□ 1.01
PMPCB-204ENST00000444457 FOXN1O15353 648 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 RNF40O75150 1001 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 GSCP56915 257 aaPredicted RBP21.34■■□□□ 1.01
PMPCB-204ENST00000444457 WHAMMP3Q1A5X7 153 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 HSP90AA4PQ58FG1 418 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 AFAP1L1Q8TED9 768 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 ZNF384Q8TF68 577 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 CELF1Q92879 486 aaKnown RBP21.34■■□□□ 1.01
PMPCB-204ENST00000444457 SECISBP2LQ93073 1101 aaKnown RBP21.34■■□□□ 1.01
PMPCB-204ENST00000444457 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 PRPF6O94906 941 aaKnown RBP21.34■■□□□ 1.01
PMPCB-204ENST00000444457 KIF4BQ2VIQ3 1234 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 PLEKHA4Q9H4M7 779 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 HOOK1Q9UJC3 728 aaKnown RBP21.34■■□□□ 1.01
PMPCB-204ENST00000444457 NFE2L3Q9Y4A8 694 aa21.34■■□□□ 1.01
PMPCB-204ENST00000444457 CTAGE15A4D2H0 777 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 CTAGE8P0CG41 777 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 NR1I3Q14994 352 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 ZNF569Q5MCW4 686 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 BICDL1Q6ZP65 573 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 CTAGE6Q86UF2 777 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 CTAGE4Q8IX94 777 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 ZNF579Q8NAF0 562 aaKnown RBP21.33■■□□□ 1.01
PMPCB-204ENST00000444457 CTCFLQ8NI51 663 aaPredicted RBP21.33■■□□□ 1.01
PMPCB-204ENST00000444457 ENOX1Q8TC92 643 aaKnown RBP21.33■■□□□ 1.01
PMPCB-204ENST00000444457 SHISA4Q96DD7 197 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 CEP131Q9UPN4 1083 aa21.33■■□□□ 1.01
PMPCB-204ENST00000444457 A0A0U1RQJ8 604 aa21.33■■□□□ 1
PMPCB-204ENST00000444457 SYF2O95926 243 aaKnown RBP21.33■■□□□ 1
PMPCB-204ENST00000444457 AKAP17AQ02040 695 aaKnown RBP21.33■■□□□ 1
PMPCB-204ENST00000444457 RASGRP2Q7LDG7 609 aa21.33■■□□□ 1
PMPCB-204ENST00000444457 ATRIPQ8WXE1 791 aa21.33■■□□□ 1
PMPCB-204ENST00000444457 SRPRBQ9Y5M8 271 aaKnown RBP21.33■■□□□ 1
PMPCB-204ENST00000444457 LAMB1P07942 1786 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 POLR2DO15514 142 aaKnown RBP21.32■■□□□ 1
PMPCB-204ENST00000444457 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 1
PMPCB-204ENST00000444457 POSTNQ15063 836 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 PKN1Q16512 942 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 IFIT1BQ5T764 474 aaKnown RBP21.32■■□□□ 1
PMPCB-204ENST00000444457 CABP5Q9NP86 173 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 FGRP09769 529 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 XBP1P17861 261 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 FUT2Q10981 343 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 E2F4Q16254 413 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 SLC10A5Q5PT55 438 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 TBC1D9BQ66K14 1250 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 FBXO33Q7Z6M2 555 aa21.32■■□□□ 1
PMPCB-204ENST00000444457 A0A1B0GTH6 734 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 PRDM1O75626 825 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 PCP11498 1178 aaKnown RBP21.31■■□□□ 1
PMPCB-204ENST00000444457 KCNQ4P56696 695 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 CATIPQ7Z7H3 387 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 IQCA1Q86XH1 822 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 VPS54Q9P1Q0 977 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 SERTAD1Q9UHV2 236 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 SEMA3EO15041 775 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 NT5DC1Q5TFE4 455 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 SLC35F6Q8N357 371 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 MICALL1Q8N3F8 863 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 MAN1B1Q9UKM7 699 aa21.31■■□□□ 1
PMPCB-204ENST00000444457 PRPF3O43395 683 aaKnown RBP21.3■■□□□ 1
PMPCB-204ENST00000444457 SHOX2O60902 331 aaPredicted RBP21.3■■□□□ 1
PMPCB-204ENST00000444457 KLRK1P26718 216 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 GPATCH11Q8N954 259 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 MLKLQ8NB16 471 aa21.3■■□□□ 1
PMPCB-204ENST00000444457 NSUN4Q96CB9 384 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms