RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 BPIFA3Q9BQP9 254 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 FTOQ9C0B1 505 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 MMRN2Q9H8L6 949 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 EPN1Q9Y6I3 576 aaPredicted RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 SCAF11Q99590 1463 aaKnown RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 COL17A1Q9UMD9 1497 aaPredicted RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 SPATA31E1Q6ZUB1 1445 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 ZNF521Q96K83 1311 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 RXRBP28702 533 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 GJA8P48165 433 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 PHEXP78562 749 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 DDR1Q08345 913 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 ENAHQ8N8S7 591 aaPredicted RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 IFIH1Q9BYX4 1025 aaKnown RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 KRT23Q9C075 422 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 VPS16Q9H269 839 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 HDAC9Q9UKV0 1011 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 INTUQ9ULD6 942 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 VPS41P49754 854 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 PDE6CP51160 858 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 VSNL1P62760 191 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 PIP4K2CQ8TBX8 421 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 CCT8L2Q96SF2 557 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 LRRC27Q9C0I9 530 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 HELLSQ9NRZ9 838 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 SLC12A7Q9Y666 1083 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 POTEJP0CG39 1038 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 GSCP56915 257 aaPredicted RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 DEUP1Q05D60 604 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 RPS6KA1Q15418 735 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 E4F1Q66K89 784 aaPredicted RBP5.67□□□□□ -1.5
SCN11A-202ENST00000444237 OLFML1Q6UWY5 402 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 SPATA21Q7Z572 469 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 TTC5Q8N0Z6 440 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 CASP10Q92851 521 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 ATP6V1G3Q96LB4 118 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 EPC1Q9H2F5 836 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 FANCLQ9NW38 375 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 MCM8Q9UJA3 840 aa5.67□□□□□ -1.5
SCN11A-202ENST00000444237 SBNO1A3KN83 1393 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 KLF18A0A0U1RQI7 1052 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ZMYND10O75800 440 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 HEXIM1O94992 359 aaKnown RBP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 SF3A3Q12874 501 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 POSTNQ15063 836 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 PPP4R3AQ6IN85 833 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ZNF280CQ8ND82 737 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 NCOA7Q8NI08 942 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 KCNV2Q8TDN2 545 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 KCNG1Q9UIX4 513 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 HPCAL4Q9UM19 191 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ZDHHC9Q9Y397 364 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 NUB1Q9Y5A7 615 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 UGGT1Q9NYU2 1555 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 DYTNA2CJ06 578 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 RAD21O60216 631 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 FAM107AO95990 144 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 MDH1P40925 334 aaKnown RBP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 RPS6KA3P51812 740 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 TBC1D8BQ0IIM8 1120 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 DHX32Q7L7V1 743 aaKnown RBP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 C8orf37Q96NL8 207 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 PARVBQ9HBI1 364 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 XAB2Q9HCS7 855 aaKnown RBP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 MBIPQ9NS73 344 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 CTNND2Q9UQB3 1225 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ADGRL2O95490 1459 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 IQCA1LA6NCM1 817 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 WASLO00401 505 aaPredicted RBP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 C21orf2O43822 256 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 HMGB2P26583 209 aaKnown RBP5.66□□□□□ -1.5
SCN11A-202ENST00000444237 KCNB1Q14721 858 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 BICDL1Q6ZP65 573 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ANKRD42Q8N9B4 389 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 MGARPQ8TDB4 240 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ATP6V0A1Q93050 837 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 IWS1Q96ST2 819 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 UNC45AQ9H3U1 944 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 MAP3K5Q99683 1374 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 FAM200BP0CF97 657 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 KCNA3P22001 575 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 CMA1P23946 247 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 PPP2R2AP63151 447 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 IL9RQ01113 521 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 PAK1Q13153 545 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 SEL1L2Q5TEA6 688 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 NCAPH2Q6IBW4 605 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 SYCE1Q8N0S2 351 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 CHMP6Q96FZ7 201 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 RUNDC3BQ96NL0 473 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 RAB34Q9BZG1 259 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ECT2Q9H8V3 914 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 UBAP1Q9NZ09 502 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 PARP3Q9Y6F1 533 aa5.66□□□□□ -1.5
SCN11A-202ENST00000444237 ANO9A1A5B4 782 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 E7ENQ6 273 aa5.65□□□□□ -1.5
SCN11A-202ENST00000444237 SOCS7O14512 581 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms