RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TAOK1Q7L7X3 1001 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 TBC1D7Q9P0N9 293 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 ABL1P00519 1130 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 IVLP07476 585 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 CCDC6Q16204 474 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 ZNF569Q5MCW4 686 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 LRFN2Q9ULH4 789 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 ARHGEF37A1IGU5 675 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 POSTNQ15063 836 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 DDAH1O94760 285 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 PRR16Q569H4 304 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 VPS52Q8N1B4 723 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 LRRC47Q8N1G4 583 aaKnown RBP12.42□□□□□ -0.42
FN1-211ENST00000443816 CDHR1Q96JP9 859 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 SGSM2O43147 1006 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 RLBP1P12271 317 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 HSPA4P34932 840 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 CCDC89Q8N998 374 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
FN1-211ENST00000443816 RABGAP1Q9Y3P9 1069 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 CIAO1O76071 339 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 STAT2P52630 851 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 CCDC84Q86UT8 332 aaPredicted RBP12.42□□□□□ -0.42
FN1-211ENST00000443816 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 HAUS1Q96CS2 278 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 SELENOSQ9BQE4 189 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 VPS54Q9P1Q0 977 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
FN1-211ENST00000443816 CCND2P30279 289 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 XKR9Q5GH70 373 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 PFDN4Q9NQP4 134 aa12.42□□□□□ -0.42
FN1-211ENST00000443816 UAP1Q16222 522 aaPredicted RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 UTP14CQ5TAP6 766 aaKnown RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 MAIP1Q8WWC4 291 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 VPS16Q9H269 839 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 ZNF202O95125 648 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 MIS18BP1Q6P0N0 1132 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 IFT81Q8WYA0 676 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 SLC10A4Q96EP9 437 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 SERPINA10Q9UK55 444 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 TLR3O15455 904 aaKnown RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 FOSP01100 380 aaPredicted RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 LZTFL1Q9NQ48 299 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 RNF216Q9NWF9 866 aaPredicted RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 PFDN6O15212 129 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 XRCC5P13010 732 aaKnown RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 SDR42E1Q8WUS8 393 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 FEZ2Q9UHY8 353 aaPredicted RBP12.41□□□□□ -0.42
FN1-211ENST00000443816 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 ERFEQ4G0M1 354 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 AKT3Q9Y243 479 aa12.41□□□□□ -0.42
FN1-211ENST00000443816 PDE8BO95263 885 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 CCDC110Q8TBZ0 833 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 UBLCP1Q8WVY7 318 aaPredicted RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 NCOA5Q9HCD5 579 aaKnown RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 ASAP1Q9ULH1 1129 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 TUBB2AQ13885 445 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 SLFN13Q68D06 897 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 DYMQ7RTS9 669 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 C2orf69Q8N8R5 385 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 TUBB2BQ9BVA1 445 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 KRT81Q14533 505 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 PDZD4Q76G19 769 aaPredicted RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 PTPREP23469 700 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 RAD51AP2Q09MP3 1159 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 GPBP1Q86WP2 473 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 PIM2Q9P1W9 311 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 MAPK8IP1Q9UQF2 711 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 ZMYM6O95789 1325 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 POLR2BP30876 1174 aaKnown RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 SARNPP82979 210 aaKnown RBP12.4□□□□□ -0.42
FN1-211ENST00000443816 CASC4Q6P4E1 433 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 USP6P35125 1406 aa12.4□□□□□ -0.42
FN1-211ENST00000443816 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.43
FN1-211ENST00000443816 CALCOCO1Q9P1Z2 691 aa12.4□□□□□ -0.43
FN1-211ENST00000443816 CAMSAP1Q5T5Y3 1602 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 PDE6AP16499 860 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
FN1-211ENST00000443816 POLA2Q14181 598 aa12.39□□□□□ -0.43
FN1-211ENST00000443816 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms