RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 EGR3Q06889 387 aa7.16□□□□□ -1.26
AC003001.1-201ENST00000443247 TDRD10Q5VZ19 366 aaKnown RBP7.16□□□□□ -1.26
AC003001.1-201ENST00000443247 UNC5AQ6ZN44 842 aa7.16□□□□□ -1.26
AC003001.1-201ENST00000443247 DHRS1Q96LJ7 313 aa7.16□□□□□ -1.26
AC003001.1-201ENST00000443247 HDAC8Q9BY41 377 aa7.16□□□□□ -1.26
AC003001.1-201ENST00000443247 PCDHA11Q9Y5I1 949 aa7.16□□□□□ -1.26
AC003001.1-201ENST00000443247 PMS1P54277 932 aaKnown RBP7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 OGFOD2Q6N063 350 aa7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 PPFIBP1Q86W92 1011 aa7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 SHDQ96IW2 340 aa7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 PRDM14Q9GZV8 571 aa7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 CTNND2Q9UQB3 1225 aa7.15□□□□□ -1.26
AC003001.1-201ENST00000443247 DNAJC25-GNG10A0A024R161 153 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 C9IYK1 514 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 PRAMEF1O95521 474 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 RALGPS1Q5JS13 557 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 TTC6Q86TZ1 520 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 CCDC144CPQ8IYA2 1237 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 FLAD1Q8NFF5 587 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 OR6P1Q8NGX9 317 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 ENOX1Q8TC92 643 aaKnown RBP7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 SYTL5Q8TDW5 730 aaPredicted RBP7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 FAM86C1Q9NVL1 165 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 FBXL21Q9UKT6 434 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 PCDHB12Q9Y5F1 795 aa7.14□□□□□ -1.27
AC003001.1-201ENST00000443247 SIGLEC6O43699 453 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 GNL2Q13823 731 aaKnown RBP7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 AUHQ13825 339 aaKnown RBP7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 TINF2Q9BSI4 451 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 IGSF5Q9NSI5 407 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 GFOD1Q9NXC2 390 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 TMEM59LQ9UK28 342 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 STRIP2Q9ULQ0 834 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 MINPP1Q9UNW1 487 aa7.13□□□□□ -1.27
AC003001.1-201ENST00000443247 LTBP3Q9NS15 1303 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 MEIS1O00470 390 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 JAG1P78504 1218 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 PPP2R5EQ16537 467 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 DCAF15Q66K64 600 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 ZNF655Q8N720 491 aaPredicted RBP7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 FAM169BQ8N8A8 192 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 C19orf47Q8N9M1 422 aaKnown RBP7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 DAGLBQ8NCG7 672 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 TCTN2Q96GX1 697 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 CCDC120Q96HB5 630 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 ADAMTS10Q9H324 1103 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 CHST7Q9NS84 486 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 SLC12A7Q9Y666 1083 aa7.12□□□□□ -1.27
AC003001.1-201ENST00000443247 CARMIL2Q6F5E8 1435 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 A0A1W2PQH9 124 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 SHOXO15266 292 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 TP53P04637 393 aaPredicted RBP7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 GDNFP39905 211 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 HK2P52789 917 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 TEKQ02763 1124 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 AXDND1Q5T1B0 1012 aaPredicted RBP7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 VPS37DQ86XT2 251 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 C7orf61Q8IZ16 206 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 FAM168AQ92567 244 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 FOXP3Q9BZS1 431 aa7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 ZNF214Q9UL59 606 aaPredicted RBP7.11□□□□□ -1.27
AC003001.1-201ENST00000443247 BBS9Q3SYG4 887 aa7.1□□□□□ -1.27
AC003001.1-201ENST00000443247 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
AC003001.1-201ENST00000443247 SYTL4Q96C24 671 aaPredicted RBP7.1□□□□□ -1.27
AC003001.1-201ENST00000443247 PCDHB10Q9UN67 800 aa7.1□□□□□ -1.27
AC003001.1-201ENST00000443247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
AC003001.1-201ENST00000443247 SSBP05455 408 aaKnown RBP eCLIP7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 SYPP08247 313 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 ZGLP1P0C6A0 271 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 AFMP43652 599 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 PCBP3P57721 371 aaKnown RBP7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 GNPTABQ3T906 1256 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 FYB2Q5VWT5 728 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 RNF111Q6ZNA4 994 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 ZSWIM9Q86XI8 627 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 POU5F2Q8N7G0 328 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 DSCC1Q9BVC3 393 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 PHAXQ9H814 394 aaKnown RBP7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 TCFL5Q9UL49 500 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 MRVI1Q9Y6F6 885 aa7.09□□□□□ -1.27
AC003001.1-201ENST00000443247 SSU72P8A0A1W2PR75 194 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 FKTNO75072 461 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 C8AP07357 584 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 RPL10P27635 214 aaKnown RBP7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 CASP7P55210 303 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 ERVFC1P60507 584 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 CRTC3Q6UUV7 619 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 DHX38Q92620 1227 aaKnown RBP7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 KIRREL1Q96J84 757 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 GP6Q9HCN6 339 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 PRR13Q9NZ81 148 aa7.08□□□□□ -1.28
AC003001.1-201ENST00000443247 FGRP09769 529 aa7.07□□□□□ -1.28
AC003001.1-201ENST00000443247 RAC2P15153 192 aa7.07□□□□□ -1.28
AC003001.1-201ENST00000443247 DNAJA1P31689 397 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms