RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 USP17L11C9JVI0 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP17L18D6R9N7 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP17L22D6RA61 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP17L17D6RBQ6 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP17L19D6RCP7 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP17L20D6RJB6 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 F5H6K3 240 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 ZNF213O14771 459 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 WDR46O15213 610 aaKnown RBP9.75□□□□□ -0.85
TIMP1-203ENST00000441738 KDM4AO75164 1064 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TTLL1O95922 423 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP14P54578 494 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 KLRC3Q07444 240 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 USP17L24Q0WX57 530 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 SEC23AQ15436 765 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 RRP12Q5JTH9 1297 aaKnown RBP9.75□□□□□ -0.85
TIMP1-203ENST00000441738 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 MB21D2Q8IYB1 491 aaPredicted RBP9.75□□□□□ -0.85
TIMP1-203ENST00000441738 RASEFQ8IZ41 740 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 ZNF444Q8N0Y2 327 aaPredicted RBP9.75□□□□□ -0.85
TIMP1-203ENST00000441738 DEFB123Q8N688 67 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 LPAR1Q92633 364 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 ATG4CQ96DT6 458 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TMEM47Q9BQJ4 181 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 ZKSCAN3Q9BRR0 538 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TCP11L1Q9NUJ3 509 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TMOD4Q9NZQ9 345 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 CLIP2Q9UDT6 1046 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 GABRQQ9UN88 632 aa9.75□□□□□ -0.85
TIMP1-203ENST00000441738 TSPY2A6NKD2 308 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 E7EWF7 191 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 SLC27A2O14975 620 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 RANBP6O60518 1105 aaKnown RBP9.74□□□□□ -0.85
TIMP1-203ENST00000441738 SNHG28P0DPA3 235 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 PCP11498 1178 aaKnown RBP9.74□□□□□ -0.85
TIMP1-203ENST00000441738 OSBPP22059 807 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 DSG3P32926 999 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 ERVK-9P63128 1117 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 ERVK-24P63145 666 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 SLC35G1Q2M3R5 365 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 ENAHQ8N8S7 591 aaPredicted RBP9.74□□□□□ -0.85
TIMP1-203ENST00000441738 RUFY2Q8WXA3 655 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 KCNB2Q92953 911 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
TIMP1-203ENST00000441738 ZSWIM5Q9P217 1185 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 PNMA3Q9UL41 463 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 ZNF214Q9UL59 606 aaPredicted RBP9.74□□□□□ -0.85
TIMP1-203ENST00000441738 SYNPO2Q9UMS6 1093 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 NR2E3Q9Y5X4 410 aa9.74□□□□□ -0.85
TIMP1-203ENST00000441738 U3KPZ7 1027 aaPredicted RBP9.74□□□□□ -0.85
TIMP1-203ENST00000441738 IGHA2P01877 340 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 SLC3A2P08195 630 aaKnown RBP9.73□□□□□ -0.85
TIMP1-203ENST00000441738 TAL1P17542 331 aaPredicted RBP9.73□□□□□ -0.85
TIMP1-203ENST00000441738 PSMC4P43686 418 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
TIMP1-203ENST00000441738 IRX3P78415 501 aaPredicted RBP9.73□□□□□ -0.85
TIMP1-203ENST00000441738 PRKCZQ05513 592 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 TMEM132BQ14DG7 1078 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 IMMTQ16891 758 aaKnown RBP9.73□□□□□ -0.85
TIMP1-203ENST00000441738 ADCK5Q3MIX3 580 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 SLC9C1Q4G0N8 1177 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 CREB3L3Q68CJ9 461 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 SMCR8Q8TEV9 937 aaPredicted RBP9.73□□□□□ -0.85
TIMP1-203ENST00000441738 ANKS1AQ92625 1134 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 USP6NLQ92738 828 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 CHMP4CQ96CF2 233 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 GMCL1Q96IK5 515 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 TANGO6Q9C0B7 1094 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 ZNF287Q9HBT7 754 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 GJD2Q9UKL4 321 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 PPP1R9AQ9ULJ8 1098 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 STX8Q9UNK0 236 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 PTCH2Q9Y6C5 1203 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 ZNF536O15090 1300 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 TNKSO95271 1327 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 MYPNQ86TC9 1320 aa9.73□□□□□ -0.85
TIMP1-203ENST00000441738 DNAH12Q6ZR08 3092 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 MYCP01106 439 aaPredicted RBP9.72□□□□□ -0.85
TIMP1-203ENST00000441738 PDHBP11177 359 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 PABPC4Q13310 644 aaKnown RBP eCLIP9.72□□□□□ -0.85
TIMP1-203ENST00000441738 COG2Q14746 738 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 SLFN13Q68D06 897 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 TTBK2Q6IQ55 1244 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 Q7L0L9 218 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 ESR2Q92731 530 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 PAGR1Q9BTK6 254 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 HTATIP2Q9BUP3 242 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 MOV10L1Q9BXT6 1211 aaKnown RBP9.72□□□□□ -0.85
TIMP1-203ENST00000441738 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
TIMP1-203ENST00000441738 SH2D4AQ9H788 454 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 GOPCQ9HD26 462 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 ANO2Q9NQ90 1003 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 SRRDQ9UH36 339 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 CTNNA3Q9UI47 895 aa9.72□□□□□ -0.85
TIMP1-203ENST00000441738 RABGAP1Q9Y3P9 1069 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms