RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SEMA3EO15041 775 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 UBXN1Q04323 297 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 TTLL11Q8NHH1 800 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 GNL3LQ9NVN8 582 aaKnown RBP22.8■■□□□ 1.24
SHOX2-203ENST00000441443 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 PES1O00541 588 aaKnown RBP22.8■■□□□ 1.24
SHOX2-203ENST00000441443 MRPS25P82663 173 aaKnown RBP22.8■■□□□ 1.24
SHOX2-203ENST00000441443 CCNI2Q6ZMN8 369 aaPredicted RBP22.8■■□□□ 1.24
SHOX2-203ENST00000441443 SH3RF1Q7Z6J0 888 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 JAKMIP2Q96AA8 810 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 GSDMAQ96QA5 445 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 TACC3Q9Y6A5 838 aa22.8■■□□□ 1.24
SHOX2-203ENST00000441443 XIRP1Q702N8 1843 aaKnown RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 PDE2AO00408 941 aaPredicted RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 C2orf54Q08AI8 447 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 RTN1Q16799 776 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 EARS2Q5JPH6 523 aaKnown RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 DZIP3Q86Y13 1208 aaKnown RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 NUP133Q8WUM0 1156 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 FAM107BQ9H098 131 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 LIMA1Q9UHB6 759 aaKnown RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 ZNF532Q9HCE3 1301 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 TTC26A0AVF1 554 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 HNRNPH1P31943 449 aaKnown RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 HERVK_113P62684 666 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 PIH1D3Q9NQM4 214 aaKnown RBP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 ANKRD18BA2A2Z9 1011 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 CAPS2Q9BXY5 557 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 HAUS4Q9H6D7 363 aa22.79■■□□□ 1.24
SHOX2-203ENST00000441443 AATFQ9NY61 560 aaKnown RBP eCLIP22.79■■□□□ 1.24
SHOX2-203ENST00000441443 KCNJ18B7U540 433 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 WNT7AO00755 349 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 GNGT1P63211 74 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 KCNJ12Q14500 433 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 CT47A1Q5JQC4 288 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-203ENST00000441443 VPS54Q9P1Q0 977 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 PARP4Q9UKK3 1724 aaKnown RBP22.78■■□□□ 1.24
SHOX2-203ENST00000441443 CYP19A1P11511 503 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-203ENST00000441443 LIFRP42702 1097 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 TTF1Q15361 905 aaPredicted RBP22.78■■□□□ 1.24
SHOX2-203ENST00000441443 TCP11X2Q5H9J9 407 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 SWT1Q5T5J6 900 aaKnown RBP22.78■■□□□ 1.24
SHOX2-203ENST00000441443 KCNV1Q6PIU1 500 aa22.78■■□□□ 1.24
SHOX2-203ENST00000441443 RRP36Q96EU6 259 aaKnown RBP22.78■■□□□ 1.24
SHOX2-203ENST00000441443 hCG_1642624A0A1W2PR95 340 aa22.77■■□□□ 1.24
SHOX2-203ENST00000441443 TARSL2A2RTX5 802 aaKnown RBP22.77■■□□□ 1.24
SHOX2-203ENST00000441443 TRIM75PA6NK02 468 aa22.77■■□□□ 1.24
SHOX2-203ENST00000441443 CCDC91Q7Z6B0 441 aa22.77■■□□□ 1.24
SHOX2-203ENST00000441443 CTSWP56202 376 aa22.77■■□□□ 1.24
SHOX2-203ENST00000441443 PAPD7Q5XG87 772 aaKnown RBP22.77■■□□□ 1.24
SHOX2-203ENST00000441443 SND1Q7KZF4 910 aaKnown RBP eCLIP22.76■■□□□ 1.23
SHOX2-203ENST00000441443 KIAA1328Q86T90 577 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 CRACR2BQ8N4Y2 399 aaPredicted RBP22.76■■□□□ 1.23
SHOX2-203ENST00000441443 CEP89Q96ST8 783 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 LRRC10BA6NIK2 292 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 DEXIO95424 95 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 PPFIA1Q13136 1202 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 EZH2Q15910 746 aaKnown RBP22.76■■□□□ 1.23
SHOX2-203ENST00000441443 JADE2Q9NQC1 790 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 DUSP10Q9Y6W6 482 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 LAMB4A4D0S4 1761 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 NUTM2BA6NNL0 878 aaPredicted RBP22.76■■□□□ 1.23
SHOX2-203ENST00000441443 NUTM2EB1AL46 878 aaPredicted RBP22.76■■□□□ 1.23
SHOX2-203ENST00000441443 OR8K1Q8NGG5 319 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 HDAC7Q8WUI4 952 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 AIDAQ96BJ3 306 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 LACRTQ9GZZ8 138 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 TNS2Q63HR2 1409 aa22.76■■□□□ 1.23
SHOX2-203ENST00000441443 GRIN2DO15399 1336 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 RCCD1A6NED2 376 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 INPP5BP32019 993 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 FKBP15Q5T1M5 1219 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 ANKRD20A12PQ8NF67 263 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 NELFBQ8WX92 580 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 SHISA4Q96DD7 197 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 SHTN1A0MZ66 631 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 CSF1RP07333 972 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 PHKA1P46020 1223 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 TRIM28Q13263 835 aaKnown RBP22.75■■□□□ 1.23
SHOX2-203ENST00000441443 TRIM14Q14142 442 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 ZNF174Q15697 407 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 RIPOR2Q9Y4F9 1068 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 XDHP47989 1333 aa22.75■■□□□ 1.23
SHOX2-203ENST00000441443 EIF3HO15372 352 aaKnown RBP eCLIP22.74■■□□□ 1.23
SHOX2-203ENST00000441443 CKAP4Q07065 602 aaKnown RBP22.74■■□□□ 1.23
SHOX2-203ENST00000441443 PAK1Q13153 545 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 TEX2Q8IWB9 1127 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 NAPBQ9H115 298 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 EPB41L4AQ9HCS5 686 aaPredicted RBP22.74■■□□□ 1.23
SHOX2-203ENST00000441443 POLD4Q9HCU8 107 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 LUC7L2Q9Y383 392 aaKnown RBP22.74■■□□□ 1.23
SHOX2-203ENST00000441443 PPARAQ07869 468 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 WDR59Q6PJI9 974 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 MYO5AQ9Y4I1 1855 aaKnown RBP22.74■■□□□ 1.23
SHOX2-203ENST00000441443 MACROD2A1Z1Q3 448 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 PRDM1O75626 825 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 PDE6AP16499 860 aa22.74■■□□□ 1.23
SHOX2-203ENST00000441443 STRBPQ96SI9 672 aaKnown RBP22.74■■□□□ 1.23
SHOX2-203ENST00000441443 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
SHOX2-203ENST00000441443 RWDD2AQ9UIY3 292 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms