RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 CCDC65Q8IXS2 484 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 UBL4BQ8N7F7 174 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 THOC1Q96FV9 657 aaKnown RBP16.18■□□□□ 0.18
PCNX1-202ENST00000439984 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 PSMD2Q13200 908 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 TROVE2P10155 538 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCNX1-202ENST00000439984 ELF1P32519 619 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 VPS41P49754 854 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 VWA3BQ502W6 1294 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 EHHADHQ08426 723 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 LETM2Q2VYF4 491 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
PCNX1-202ENST00000439984 CROCC2H7BZ55 1655 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 TTC38Q5R3I4 469 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 CAPN12Q6ZSI9 719 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 SYNCQ9H7C4 482 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 TIMM10P62072 90 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 INTUQ9ULD6 942 aa16.18■□□□□ 0.18
PCNX1-202ENST00000439984 SRGAP2O75044 1071 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 DEXIO95424 95 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 CALML3P27482 149 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 SCRN1Q12765 414 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 CNNM4Q6P4Q7 775 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 DYMQ7RTS9 669 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 CUL5Q93034 780 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
PCNX1-202ENST00000439984 TBC1D7Q9P0N9 293 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 FLT4P35916 1363 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 CTTNBP2NLQ9P2B4 639 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 YEATS2Q9ULM3 1422 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 ABCC4O15439 1325 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 E7EWF7 191 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 SMYD4Q8IYR2 804 aaPredicted RBP16.17■□□□□ 0.18
PCNX1-202ENST00000439984 WHAMMQ8TF30 809 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 COMMD10Q9Y6G5 202 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 EDC4Q6P2E9 1401 aaKnown RBP16.17■□□□□ 0.18
PCNX1-202ENST00000439984 PPFIA2O75334 1257 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 IL15P40933 162 aaPredicted RBP16.17■□□□□ 0.18
PCNX1-202ENST00000439984 INF2Q27J81 1249 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 SPATA1Q5VX52 437 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 SCYL3Q8IZE3 742 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 RPGRQ92834 1020 aaKnown RBP16.17■□□□□ 0.18
PCNX1-202ENST00000439984 GEMIN8Q9NWZ8 242 aaKnown RBP16.17■□□□□ 0.18
PCNX1-202ENST00000439984 RTL9Q8NET4 1388 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 IQGAP3Q86VI3 1631 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 H0Y3Z8 333 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 RASSF7Q02833 373 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 VPS37BQ9H9H4 285 aa16.17■□□□□ 0.18
PCNX1-202ENST00000439984 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
PCNX1-202ENST00000439984 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
PCNX1-202ENST00000439984 SLC39A6Q13433 755 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 SAMSN1Q9NSI8 373 aaKnown RBP16.16■□□□□ 0.18
PCNX1-202ENST00000439984 TSPY3P0CV98 308 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 TSPY8P0CW00 308 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 ATP8A1Q9Y2Q0 1164 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 PLXNC1O60486 1568 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 TNNI2P48788 182 aa16.16■□□□□ 0.18
PCNX1-202ENST00000439984 IKBKBO14920 756 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 SLCO1A2P46721 670 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 IRX1P78414 480 aaPredicted RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 PPP1R21Q6ZMI0 780 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 MYOM2P54296 1465 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 CTIFO43310 598 aaKnown RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 GAS8O95995 478 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 ARL1P40616 181 aaPredicted RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 GRAMD1CQ8IYS0 662 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 ERMNQ8TAM6 284 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 YY1AP1Q9H869 796 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 I3L4J1 428 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 SERPINB6P35237 376 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 COPB1P53618 953 aaKnown RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 CCDC97Q96F63 343 aaPredicted RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 PLEKHF1Q96S99 279 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 TXNDC16Q9P2K2 825 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 ABCB4P21439 1286 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
PCNX1-202ENST00000439984 FBXO41Q8TF61 875 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 EPSTI1Q96J88 318 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 MYO1AQ9UBC5 1043 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 NFU1Q9UMS0 254 aa16.15■□□□□ 0.18
PCNX1-202ENST00000439984 TMEM87AQ8NBN3 555 aa16.14■□□□□ 0.18
PCNX1-202ENST00000439984 ELAC2Q9BQ52 826 aaKnown RBP16.14■□□□□ 0.18
PCNX1-202ENST00000439984 MOCS3O95396 460 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 LSM14BQ9BX40 385 aaKnown RBP16.14■□□□□ 0.17
PCNX1-202ENST00000439984 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 KIF1BO60333 1816 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 ALS2CLQ60I27 953 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
PCNX1-202ENST00000439984 CCDC169A6NNP5 214 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms