RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ZNF70Q9UC06 446 aaPredicted RBP17.27■□□□□ 0.35
CPSF7-205ENST00000439958 IGSF3O75054 1194 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 SYKP43405 635 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 GRIN1Q05586 938 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 TYRO3Q06418 890 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 WWC2Q6AWC2 1192 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 ROBO3Q96MS0 1386 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 PDHBP11177 359 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 PFKFB1P16118 471 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 PRAMEF18Q5VWM3 479 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 NFKBIEO00221 500 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 EGFRP00533 1210 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
CPSF7-205ENST00000439958 GABPAQ06546 454 aa17.26■□□□□ 0.35
CPSF7-205ENST00000439958 NRXN2Q9P2S2 1712 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 KRI1Q8N9T8 703 aaKnown RBP17.25■□□□□ 0.35
CPSF7-205ENST00000439958 VIL1P09327 827 aaKnown RBP17.25■□□□□ 0.35
CPSF7-205ENST00000439958 PRKG1Q13976 671 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 INF2Q27J81 1249 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 BLIDQ8IZY5 108 aa17.25■□□□□ 0.35
CPSF7-205ENST00000439958 BIN2Q9UBW5 565 aaPredicted RBP17.25■□□□□ 0.35
CPSF7-205ENST00000439958 LRRC37AA6NMS7 1700 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 ZNF202O95125 648 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 HDLBPQ00341 1268 aaKnown RBP17.24■□□□□ 0.35
CPSF7-205ENST00000439958 LUZP1Q86V48 1076 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 TCP11L1Q9NUJ3 509 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 MAST2Q6P0Q8 1798 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 SMCO2A6NFE2 343 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 MYH1P12882 1939 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 WNT7AO00755 349 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
CPSF7-205ENST00000439958 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
CPSF7-205ENST00000439958 CALML3P27482 149 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 USH1GQ495M9 461 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 MICALL2Q8IY33 904 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 FEZ1Q99689 392 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 CEP131Q9UPN4 1083 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 CDC25AP30304 524 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 GMPSP49915 693 aaPredicted RBP17.23■□□□□ 0.35
CPSF7-205ENST00000439958 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 IDI2Q9BXS1 227 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
CPSF7-205ENST00000439958 WNT10BO00744 389 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 TNIP1Q15025 636 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 CNNM3Q8NE01 707 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 CCDC17Q96LX7 622 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-205ENST00000439958 BECN2A8MW95 431 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 USP17L10C9JJH3 530 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 PTGDRQ13258 359 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 GRIPAP1Q4V328 841 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 FOXP4Q8IVH2 680 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-205ENST00000439958 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 POLR2DO15514 142 aaKnown RBP17.22■□□□□ 0.35
CPSF7-205ENST00000439958 TAL1P17542 331 aaPredicted RBP17.22■□□□□ 0.35
CPSF7-205ENST00000439958 TNNI2P48788 182 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 USP49Q70CQ1 688 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 PLIN2Q99541 437 aa17.22■□□□□ 0.35
CPSF7-205ENST00000439958 KCNH3Q9ULD8 1083 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 MARCH6O60337 910 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 ZNF165P49910 485 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
CPSF7-205ENST00000439958 STAMQ92783 540 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 DHX58Q96C10 678 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 MAP3K14Q99558 947 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
CPSF7-205ENST00000439958 ECE1P42892 770 aa17.21■□□□□ 0.34
CPSF7-205ENST00000439958 FKBP1AP62942 108 aaKnown RBP17.21■□□□□ 0.34
CPSF7-205ENST00000439958 RASA3Q14644 834 aa17.21■□□□□ 0.34
CPSF7-205ENST00000439958 PTPAQ15257 358 aa17.21■□□□□ 0.34
CPSF7-205ENST00000439958 AXDND1Q5T1B0 1012 aaPredicted RBP17.21■□□□□ 0.34
CPSF7-205ENST00000439958 CSRNP2Q9H175 543 aa17.21■□□□□ 0.34
CPSF7-205ENST00000439958 SPON1Q9HCB6 807 aa17.21■□□□□ 0.34
CPSF7-205ENST00000439958 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.34
CPSF7-205ENST00000439958 ADGRF4Q8IZF3 695 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 TMEM260Q9NX78 707 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 PCDHA4Q9UN74 947 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 AFMP43652 599 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
CPSF7-205ENST00000439958 FHDC1Q9C0D6 1143 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms