RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 MCCP23508 829 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 MCM5P33992 734 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 SLC1A4P43007 532 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 PSMC4P43686 418 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 PRMT2P55345 433 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 KIAA1755Q5JYT7 1200 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 FAM83BQ5T0W9 1011 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 TMTC2Q8N394 836 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 CD99L2Q8TCZ2 262 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 KAT14Q9H8E8 782 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 RBPJLQ9UBG7 517 aa11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-213ENST00000439732 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 ZBED4O75132 1171 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 MAPK4P31152 587 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 FCGRTP55899 365 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 ERVK-9P63128 1117 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 ERVK-24P63145 666 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 IFIT1BQ5T764 474 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 FAM160B2Q86V87 743 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 SLF1Q9BQI6 1058 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
SMARCA2-213ENST00000439732 TNKSO95271 1327 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 TMEM232C9JQI7 657 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 HSPA4P34932 840 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 IKQ13123 557 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 WTAPQ15007 396 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 MB21D2Q8IYB1 491 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 PNMA1Q8ND90 353 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 KCNB2Q92953 911 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 COA7Q96BR5 231 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 NEK1Q96PY6 1258 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 NUP88Q99567 741 aaPredicted RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 USP26Q9BXU7 913 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 CWC22Q9HCG8 908 aaKnown RBP11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 ADAMTS5Q9UNA0 930 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 TRIM17Q9Y577 477 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 DOCK3Q8IZD9 2030 aa11.16□□□□□ -0.62
SMARCA2-213ENST00000439732 WDR19Q8NEZ3 1342 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 VWA5AO00534 786 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 SLC25A27O95847 323 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 PSMA5P28066 241 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 COPB2P35606 906 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 STAT2P52630 851 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 SEC23AQ15436 765 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 CCDC96Q2M329 555 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 GPATCH4Q5T3I0 446 aaKnown RBP11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 STOX1Q6ZVD7 989 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 CYB5R4Q7L1T6 521 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 CATIPQ7Z7H3 387 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 ATG4CQ96DT6 458 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 PNMA2Q9UL42 364 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 MTMR7Q9Y216 660 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 TAF6LQ9Y6J9 622 aa11.15□□□□□ -0.62
SMARCA2-213ENST00000439732 TNPO2O14787 897 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 PRC1O43663 620 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 STRNO43815 780 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 STAT3P40763 770 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 LIFRP42702 1097 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 PLS1Q14651 629 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 Q3C1V9 767 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 FBXO46Q6PJ61 603 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 BTNL9Q6UXG8 535 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 KCTD1Q719H9 257 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 DHX32Q7L7V1 743 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 IGDCC4Q8TDY8 1250 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 SPATC1LQ9H0A9 340 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 MROH8Q9H579 483 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 FBXO28Q9NVF7 368 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
SMARCA2-213ENST00000439732 RLFQ13129 1914 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 MGAMO43451 1857 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 ATP2A1O14983 1001 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 CNMDO75829 334 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 PARP1P09874 1014 aaKnown RBP11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 PDHBP11177 359 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 OAZ1P54368 228 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 ANTXR2P58335 489 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 FGD1P98174 961 aa11.13□□□□□ -0.63
SMARCA2-213ENST00000439732 ZNF543Q08ER8 600 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms