RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 RBM28Q9NW13 759 aaKnown RBP11.61□□□□□ -0.55
CBX5-202ENST00000439541 CCDC196A0A1B0GTZ2 297 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 CYTH3O43739 400 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 CDKL5O76039 1030 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 FMNL1O95466 1100 aaPredicted RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 KIF5BP33176 963 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 HMGN5P82970 282 aaKnown RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 CPLX2Q6PUV4 134 aaKnown RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 LDHDQ86WU2 507 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 MKL1Q969V6 931 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 CHAMP1Q96JM3 812 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 FEZ1Q99689 392 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 UBA5Q9GZZ9 404 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 KLRF2D3W0D1 207 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 F5H6K3 240 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 PTPRAP18433 802 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 SLC16A2P36021 539 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 KLRC3Q07444 240 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 SSRP1Q08945 709 aaKnown RBP11.6□□□□□ -0.55
CBX5-202ENST00000439541 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 PICK1Q9NRD5 415 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 TMX2Q9Y320 296 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
CBX5-202ENST00000439541 PHIPQ8WWQ0 1821 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 TRIM75PA6NK02 468 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 STX6O43752 255 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 SLC1A4P43007 532 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 MTMR2Q13614 643 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 LARP1BQ659C4 914 aaKnown RBP11.59□□□□□ -0.55
CBX5-202ENST00000439541 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 MAP3K14Q99558 947 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 ALG1Q9BT22 464 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 MTMR6Q9Y217 621 aa11.59□□□□□ -0.55
CBX5-202ENST00000439541 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 BRD1O95696 1058 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 NF2P35240 595 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 CLCN1P35523 988 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 PKN1Q16512 942 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 ASPRV1Q53RT3 343 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 NOL9Q5SY16 702 aaKnown RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 HOMER1Q86YM7 354 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 VCPKMTQ9H867 229 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 ELP3Q9H9T3 547 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 V9GY48 417 aaPredicted RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 IREB2P48200 963 aaKnown RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 SPP2Q13103 211 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 PPP2R5BQ15173 497 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 FOXD4L6Q3SYB3 417 aaPredicted RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 FAM83BQ5T0W9 1011 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 FOXD4L3Q6VB84 417 aaPredicted RBP11.58□□□□□ -0.56
CBX5-202ENST00000439541 DCAF4Q8WV16 495 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 GPKOWQ92917 476 aaPredicted RBP eCLIP11.58□□□□□ -0.56
CBX5-202ENST00000439541 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 VAT1LQ9HCJ6 419 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 ZHX2Q9Y6X8 837 aa11.58□□□□□ -0.56
CBX5-202ENST00000439541 BAZ2BQ9UIF8 2168 aaKnown RBP11.57□□□□□ -0.56
CBX5-202ENST00000439541 DEXIO95424 95 aa11.57□□□□□ -0.56
CBX5-202ENST00000439541 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
CBX5-202ENST00000439541 SNAP25P60880 206 aa11.57□□□□□ -0.56
CBX5-202ENST00000439541 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
CBX5-202ENST00000439541 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
CBX5-202ENST00000439541 C8orf76Q96K31 380 aa11.57□□□□□ -0.56
CBX5-202ENST00000439541 GOPCQ9HD26 462 aa11.57□□□□□ -0.56
CBX5-202ENST00000439541 RRAGDQ9NQL2 400 aaPredicted RBP11.57□□□□□ -0.56
CBX5-202ENST00000439541 VPS54Q9P1Q0 977 aa11.57□□□□□ -0.56
CBX5-202ENST00000439541 CSADQ9Y600 493 aa11.57□□□□□ -0.56
CBX5-202ENST00000439541 MYH6P13533 1939 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 WDR33Q9C0J8 1336 aaKnown RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 USP17L10C9JJH3 530 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 H3BQV1 296 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 PRPF3O43395 683 aaKnown RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 BAG4O95429 457 aaKnown RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 ZSCAN22P10073 491 aaPredicted RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 BMP3P12645 472 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 PDCP20941 246 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 GNAQP50148 359 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 HMGCS2P54868 508 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 AKAP17AQ02040 695 aaKnown RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 GPATCH4Q5T3I0 446 aaKnown RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
CBX5-202ENST00000439541 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
CBX5-202ENST00000439541 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms