RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 PPP2R5BQ15173 497 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 PPP2R5EQ16537 467 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 NUCKS1Q9H1E3 243 aaKnown RBP16.58■□□□□ 0.24
TSC2-206ENST00000439117 VCX3AQ9NNX9 186 aa16.58■□□□□ 0.24
TSC2-206ENST00000439117 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
TSC2-206ENST00000439117 RNASE9P60153 205 aaKnown RBP16.57■□□□□ 0.24
TSC2-206ENST00000439117 CTDSPL2Q05D32 466 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 MAP3K21Q5TCX8 1036 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 SYCE1Q8N0S2 351 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 NLGN1Q8N2Q7 840 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 OR8K1Q8NGG5 319 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 NAP1L4Q99733 375 aaKnown RBP16.57■□□□□ 0.24
TSC2-206ENST00000439117 VWA3AA6NCI4 1184 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 HGSO14964 777 aaPredicted RBP16.57■□□□□ 0.24
TSC2-206ENST00000439117 ATP1A2P50993 1020 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 POSTNQ15063 836 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 FAM196AQ6ZSG2 479 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 SPOPO43791 374 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 CNNM4Q6P4Q7 775 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 TRAF5O00463 557 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 GJC1P36383 396 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 ZKSCAN8Q15776 578 aaPredicted RBP16.57■□□□□ 0.24
TSC2-206ENST00000439117 MFSD14BQ5SR56 506 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 TRIM31Q9BZY9 425 aa16.57■□□□□ 0.24
TSC2-206ENST00000439117 RNF17Q9BXT8 1623 aaKnown RBP16.57■□□□□ 0.24
TSC2-206ENST00000439117 PHLPP2Q6ZVD8 1323 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 GTF2IP78347 998 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 GREM2Q9H772 168 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 HYOU1Q9Y4L1 999 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 STX2P32856 288 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 HSPA1LP34931 641 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 GYG1P46976 350 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 ADKP55263 362 aaKnown RBP16.56■□□□□ 0.24
TSC2-206ENST00000439117 E2F4Q16254 413 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 ANTXR1Q9H6X2 564 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 PPIP5K2O43314 1243 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 NIM1KQ8IY84 436 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 PFDN1O60925 122 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 GSPT1P15170 499 aaKnown RBP16.56■□□□□ 0.24
TSC2-206ENST00000439117 ZBTB17Q13105 803 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 LETM2Q2VYF4 491 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 HAUS7Q99871 368 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 IFIH1Q9BYX4 1025 aaKnown RBP16.56■□□□□ 0.24
TSC2-206ENST00000439117 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 TAB2Q9NYJ8 693 aa16.56■□□□□ 0.24
TSC2-206ENST00000439117 PRAMEF22A3QJZ6 481 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 ASIC2Q16515 512 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 HSP90AA5PQ58FG0 334 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 SV2BQ7L1I2 683 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 ARMC9Q7Z3E5 817 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 UNC13BO14795 1591 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 TROVE2P10155 538 aaKnown RBP eCLIP16.55■□□□□ 0.24
TSC2-206ENST00000439117 CCDC14Q49A88 953 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
TSC2-206ENST00000439117 PPP1R13BQ96KQ4 1090 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
TSC2-206ENST00000439117 CHRNDQ07001 517 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 PDE4DQ08499 809 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 CCDC65Q8IXS2 484 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 TPX2Q9ULW0 747 aaKnown RBP16.55■□□□□ 0.24
TSC2-206ENST00000439117 E7EWF7 191 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 PDE8BO95263 885 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 BCAMP50895 628 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 ZNF174Q15697 407 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 SMC1BQ8NDV3 1235 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 ACTR5Q9H9F9 607 aaPredicted RBP16.55■□□□□ 0.24
TSC2-206ENST00000439117 SPTLC3Q9NUV7 552 aa16.55■□□□□ 0.24
TSC2-206ENST00000439117 GMNNO75496 209 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 PDE6AP16499 860 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
TSC2-206ENST00000439117 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 MYO1AQ9UBC5 1043 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 FAM169AQ9Y6X4 670 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 TNFAIP3P21580 790 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 TRPC3Q13507 836 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 GLT8D2Q9H1C3 349 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 HEG1Q9ULI3 1381 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 NDC80O14777 642 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
TSC2-206ENST00000439117 DLGAP5Q15398 846 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 UNC5CLQ8IV45 518 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 DIS3L2Q8IYB7 885 aaKnown RBP16.54■□□□□ 0.24
TSC2-206ENST00000439117 PSMB7Q99436 277 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 ASIC3Q9UHC3 531 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 CLCN6P51797 869 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 IFT88Q13099 833 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 GRM1Q13255 1194 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 ZNF772Q68DY9 489 aaPredicted RBP16.54■□□□□ 0.24
TSC2-206ENST00000439117 HOOK2Q96ED9 719 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
TSC2-206ENST00000439117 ARPP21Q9UBL0 812 aaPredicted RBP16.54■□□□□ 0.24
TSC2-206ENST00000439117 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 FLOT1O75955 427 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms