RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 SNHG28P0DPA3 235 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 PDHBP11177 359 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 BMP3P12645 472 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 KIF5BP33176 963 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 MCM2P49736 904 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 HTRA3P83110 453 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 TROAPQ12815 778 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 GPATCH4Q5T3I0 446 aaKnown RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 OTUD7BQ6GQQ9 843 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 MICU3Q86XE3 530 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 NUP133Q8WUM0 1156 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 SENP2Q9HC62 589 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 ISY1Q9ULR0 285 aaKnown RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 NAP1L2Q9ULW6 460 aaPredicted RBP12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 SLC45A1Q9Y2W3 748 aa12.33□□□□□ -0.44
HLA-DMB-259ENST00000438510 NID2Q14112 1375 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 PARP1P09874 1014 aaKnown RBP12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 MAP2K2P36507 400 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 EVCP57679 992 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 DGKZQ13574 1117 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 GRM4Q14833 912 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 ANKRD23Q86SG2 305 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 BRI3BPQ8WY22 251 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 ZNF274Q96GC6 653 aaPredicted RBP12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 TANGO6Q9C0B7 1094 aa12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 RPAP3Q9H6T3 665 aaPredicted RBP12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
HLA-DMB-259ENST00000438510 RBBP6Q7Z6E9 1792 aaKnown RBP12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 CCDC196A0A1B0GTZ2 297 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 AOC2O75106 756 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 OSBPP22059 807 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 HOXA7P31268 230 aaPredicted RBP12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 TM4SF4P48230 202 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 VEGFBP49765 207 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 GNAQP50148 359 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 STAT2P52630 851 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 MOGSQ13724 837 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 KIAA1755Q5JYT7 1200 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 FAM160B2Q86V87 743 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 MYL10Q9BUA6 226 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 BRPF3Q9ULD4 1205 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 MYPNQ86TC9 1320 aa12.31□□□□□ -0.44
HLA-DMB-259ENST00000438510 BTBD19C9JJ37 291 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 PLA2G6O60733 806 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 FLOT1O75955 427 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 IRX3P78415 501 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 RTN1Q16799 776 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 KCTD1Q719H9 257 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 NOL8Q76FK4 1167 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 JMYQ8N9B5 988 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 FANCBQ8NB91 859 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 CHMP4CQ96CF2 233 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 ZSCAN31Q96LW9 406 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 PARK7Q99497 189 aaKnown RBP12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 LZTS2Q9BRK4 669 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 LIMCH1Q9UPQ0 1083 aa12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 FRMPD2Q68DX3 1309 aaPredicted RBP12.3□□□□□ -0.44
HLA-DMB-259ENST00000438510 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 PDHXO00330 501 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 DHX16O60231 1041 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 RXRAP19793 462 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 PDIA3P30101 505 aaKnown RBP12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 COG2Q14746 738 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
HLA-DMB-259ENST00000438510 RAB11FIP4Q86YS3 637 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms