RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 STK36Q9NRP7 1315 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 A6NNZ2 444 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 COBLO75128 1261 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 NEFHP12036 1026 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 MAP2K1Q02750 393 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-205ENST00000438362 CHRNDQ07001 517 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 PPFIA1Q13136 1202 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 TUBB8Q3ZCM7 444 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 SLC9C1Q4G0N8 1177 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 TRIM58Q8NG06 486 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 GOLGA5Q8TBA6 731 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 FAM71BQ8TC56 605 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 EPSTI1Q96J88 318 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 LZTS2Q9BRK4 669 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 FAM207AQ9NSI2 230 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-205ENST00000438362 NBPF26B4DH59 902 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-205ENST00000438362 CDC27P30260 824 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 HSPA2P54652 639 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 ST3GAL1Q11201 340 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 PICALMQ13492 652 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 PDIA6Q15084 440 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 TYW1BQ6NUM6 668 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
CSDE1-205ENST00000438362 C2CD5Q86YS7 1000 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 TEX11Q8IYF3 940 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 ZNF579Q8NAF0 562 aaKnown RBP7.46□□□□□ -1.22
CSDE1-205ENST00000438362 PNMA1Q8ND90 353 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 ACRBPQ8NEB7 543 aa7.46□□□□□ -1.22
CSDE1-205ENST00000438362 SAP30BPQ9UHR5 308 aaKnown RBP7.46□□□□□ -1.22
CSDE1-205ENST00000438362 NDUFAB1O14561 156 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 MRPL12P52815 198 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SCARF1Q14162 830 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TNIP1Q15025 636 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SEPT7Q16181 437 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 INF2Q27J81 1249 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 DYMQ7RTS9 669 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 IFT20Q8IY31 132 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SYCP3Q8IZU3 236 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 WDR66Q8TBY9 1149 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 IL17RAQ96F46 866 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TMOD2Q9NZR1 351 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 NPHP4O75161 1426 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TMEM94Q12767 1356 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 FDPSP14324 419 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 IBSPP21815 317 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 CETN2P41208 172 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 RRAGAQ7L523 313 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 GPIHBP1Q8IV16 184 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SNX29Q8TEQ0 813 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TBC1D5Q92609 795 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 EXOC4Q96A65 974 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 PAGE5Q96GU1 130 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 ITSN1Q15811 1721 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 PRPF3O43395 683 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 MFAP3LO75121 409 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 EEF1GP26641 437 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SSR1P43307 286 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TOGARAM2Q6ZUX3 1019 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 NYAP1Q6ZVC0 841 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SGMS1Q86VZ5 419 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 DPF2Q92785 391 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 ISCA1Q9BUE6 129 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 LY9Q9HBG7 655 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 NEDD4P46934 1319 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 GSTTP1A0A1W2PQM5 241 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 ERCC3P19447 782 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 RPS8P62241 208 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 CFAP221Q4G0U5 840 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 VWA3BQ502W6 1294 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 CC2D1AQ6P1N0 951 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 B4GALNT4Q76KP1 1039 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 REXO1Q8N1G1 1221 aaKnown RBP7.45□□□□□ -1.22
CSDE1-205ENST00000438362 PPM1EQ8WY54 764 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 GPKOWQ92917 476 aaPredicted RBP eCLIP7.45□□□□□ -1.221e-7■□□□□ 10.5
CSDE1-205ENST00000438362 EEF2KMTQ96G04 330 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TUBGCP2Q9BSJ2 902 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 INCENPQ9NQS7 918 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SEC31BQ9NQW1 1179 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 SLAIN2Q9P270 581 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 RWDD2AQ9UIY3 292 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 TSKSQ9UJT2 592 aa7.45□□□□□ -1.22
CSDE1-205ENST00000438362 ABCC12Q96J65 1359 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 UBN2Q6ZU65 1347 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 F8W031 263 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 ENC1O14682 589 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 SEMA3EO15041 775 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 CETN3O15182 167 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 PRPHP41219 470 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 RNASE9P60153 205 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 PAK2Q13177 524 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 UBE4AQ14139 1066 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 ALX1Q15699 326 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 CALCRLQ16602 461 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 ZNF658Q5TYW1 1059 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 DHX37Q8IY37 1157 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 STAG1Q8WVM7 1258 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms