RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 LDHCP07864 332 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 PAFAH1B1P43034 410 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 SV2BQ7L1I2 683 aa13.08□□□□□ -0.32
PDLIM5-206ENST00000437932 TXLNBQ8N3L3 684 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 CPDO75976 1380 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 IKBKBO14920 756 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 KCNQ2O43526 872 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 SCNN1DP51172 638 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 SPAG1Q07617 926 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 KRT86O43790 486 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 LRRC41Q15345 812 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 HDXQ7Z353 690 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 SPATA1Q5VX52 437 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 CNBD1Q8NA66 436 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
PDLIM5-206ENST00000437932 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 PRDX5P30044 214 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 MAEAQ7L5Y9 396 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 ANKRD13CQ8N6S4 541 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 VGLL3A8MV65 326 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 TRAF5O00463 557 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 RAPGEF1Q13905 1077 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 SLC44A5Q8NCS7 719 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 LUC7LQ9NQ29 371 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 KRT79Q5XKE5 535 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 WDR24Q96S15 920 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 EYA3Q99504 573 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 SRPRBQ9Y5M8 271 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 LMTK3Q96Q04 1460 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 SNAP25P60880 206 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 KRT83P78385 493 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 TRAPPC3LQ5T215 181 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 IGDCC4Q8TDY8 1250 aa13.06□□□□□ -0.32
PDLIM5-206ENST00000437932 IFNAR1P17181 557 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 BTDP43251 543 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 CALCRLQ16602 461 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 USP17L2Q6R6M4 530 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 ENGASEQ8NFI3 743 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 PARD6BQ9BYG5 372 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 BICDL2A1A5D9 508 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 SMIM23A6NLE4 172 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 SMIM22K7EJ46 135 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 FGFR1OPO95684 399 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 CXCR5P32302 372 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 RRAGAQ7L523 313 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
PDLIM5-206ENST00000437932 WTIPA6NIX2 430 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 TACC1O75410 805 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 SLC16A2P36021 539 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 GNAQP50148 359 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 SAMM50Q9Y512 469 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 EFCAB8A8MWE9 144 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 KIAA0754O94854 1291 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 SH3RF3Q8TEJ3 882 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 STAG1Q8WVM7 1258 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 TFR2Q9UP52 801 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 DPP8Q6V1X1 898 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 LRWD1Q9UFC0 647 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 ZEB2O60315 1214 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 KLRK1P26718 216 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 C2orf54Q08AI8 447 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 KLRF2D3W0D1 207 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 HSF2BPO75031 334 aa13.04□□□□□ -0.32
PDLIM5-206ENST00000437932 ZNF804BA4D1E1 1349 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 HLA-DOAP06340 250 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 NONOQ15233 471 aaKnown RBP eCLIP13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 COA7Q96BR5 231 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 ARPP21Q9UBL0 812 aaPredicted RBP13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 MYO6Q9UM54 1294 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 GNA11P29992 359 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 GTF2IP78347 998 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 KRT31Q15323 416 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 TBC1D9BQ66K14 1250 aa13.03□□□□□ -0.32
PDLIM5-206ENST00000437932 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms