RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 ISY1Q9ULR0 285 aaKnown RBP15.73■□□□□ 0.11
EXT1-203ENST00000437196 USP17L15C9J2P7 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L13C9JLJ4 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L11C9JVI0 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L18D6R9N7 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L22D6RA61 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L17D6RBQ6 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L19D6RCP7 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L20D6RJB6 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 OSBPP22059 807 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
EXT1-203ENST00000437196 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 CCDC96Q2M329 555 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 ANKRD23Q86SG2 305 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 SPICE1Q8N0Z3 855 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 CHURC1Q8WUH1 139 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 NUP133Q8WUM0 1156 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 ZSCAN31Q96LW9 406 aaPredicted RBP15.72■□□□□ 0.11
EXT1-203ENST00000437196 GPHNQ9NQX3 736 aaPredicted RBP15.72■□□□□ 0.11
EXT1-203ENST00000437196 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
EXT1-203ENST00000437196 FEM1BQ9UK73 627 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 LIMCH1Q9UPQ0 1083 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 MTMR7Q9Y216 660 aa15.72■□□□□ 0.11
EXT1-203ENST00000437196 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 DHX16O60231 1041 aaKnown RBP15.71■□□□□ 0.11
EXT1-203ENST00000437196 PLA2G6O60733 806 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 ALDH1A1P00352 501 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 TM4SF4P48230 202 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 METAP2P50579 478 aaKnown RBP eCLIP15.71■□□□□ 0.11
EXT1-203ENST00000437196 KIF23Q02241 960 aaPredicted RBP15.71■□□□□ 0.11
EXT1-203ENST00000437196 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 FAM160B2Q86V87 743 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 MICU3Q86XE3 530 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 BRI3BPQ8WY22 251 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 LZTS2Q9BRK4 669 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 TANGO6Q9C0B7 1094 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 RPAP3Q9H6T3 665 aaPredicted RBP15.71■□□□□ 0.11
EXT1-203ENST00000437196 SENP2Q9HC62 589 aa15.71■□□□□ 0.11
EXT1-203ENST00000437196 MYPNQ86TC9 1320 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 FDX1P10109 184 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 VEGFBP49765 207 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 STAT2P52630 851 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 IRX3P78415 501 aaPredicted RBP15.7■□□□□ 0.1
EXT1-203ENST00000437196 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
EXT1-203ENST00000437196 GRM4Q14833 912 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 CPLX2Q6PUV4 134 aaKnown RBP15.7■□□□□ 0.1
EXT1-203ENST00000437196 CATSPERGQ6ZRH7 1159 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 FANCBQ8NB91 859 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 GTF3C2Q8WUA4 911 aaPredicted RBP15.7■□□□□ 0.1
EXT1-203ENST00000437196 SH2B1Q9NRF2 756 aaPredicted RBP15.7■□□□□ 0.1
EXT1-203ENST00000437196 HOXC10Q9NYD6 342 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
EXT1-203ENST00000437196 GOLGA8AA7E2F4 631 aa15.69■□□□□ 0.1
EXT1-203ENST00000437196 PDIA3P30101 505 aaKnown RBP15.69■□□□□ 0.1
EXT1-203ENST00000437196 HTRA3P83110 453 aa15.69■□□□□ 0.1
EXT1-203ENST00000437196 MOGSQ13724 837 aa15.69■□□□□ 0.1
EXT1-203ENST00000437196 COG2Q14746 738 aa15.69■□□□□ 0.1
EXT1-203ENST00000437196 RTN1Q16799 776 aa15.69■□□□□ 0.1
EXT1-203ENST00000437196 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
EXT1-203ENST00000437196 SLKQ9H2G2 1235 aaPredicted RBP15.69■□□□□ 0.1
EXT1-203ENST00000437196 NID2Q14112 1375 aa15.69■□□□□ 0.1
EXT1-203ENST00000437196 PALM3A6NDB9 673 aaPredicted RBP15.68■□□□□ 0.1
EXT1-203ENST00000437196 BTBD19C9JJ37 291 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 TMEM232C9JQI7 657 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 PDHXO00330 501 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 FLOT1O75955 427 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 SMARCA1P28370 1054 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 KIAA1755Q5JYT7 1200 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 KCTD1Q719H9 257 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 PARK7Q99497 189 aaKnown RBP15.68■□□□□ 0.1
EXT1-203ENST00000437196 MYL10Q9BUA6 226 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 KLRF2D3W0D1 207 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 CPLX1O14810 134 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 AOC2O75106 756 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 GPAT2Q6NUI2 795 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 NUP88Q99567 741 aaPredicted RBP15.68■□□□□ 0.1
EXT1-203ENST00000437196 SLF1Q9BQI6 1058 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 MAD2L2Q9UI95 211 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 TPCN1Q9ULQ1 816 aa15.68■□□□□ 0.1
EXT1-203ENST00000437196 CTDP1Q9Y5B0 961 aaPredicted RBP15.68■□□□□ 0.1
EXT1-203ENST00000437196 FRMPD2Q68DX3 1309 aaPredicted RBP15.67■□□□□ 0.1
EXT1-203ENST00000437196 PFKFB2O60825 505 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 CDKL5O76039 1030 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 DGKZQ13574 1117 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 NOL8Q76FK4 1167 aaKnown RBP15.67■□□□□ 0.1
EXT1-203ENST00000437196 MB21D1Q8N884 522 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 SMCR8Q8TEV9 937 aaPredicted RBP15.67■□□□□ 0.1
EXT1-203ENST00000437196 SNX21Q969T3 373 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 PTPN18Q99952 460 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 ASCC2Q9H1I8 757 aaPredicted RBP15.67■□□□□ 0.1
EXT1-203ENST00000437196 GPCPD1Q9NPB8 672 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 RBM27Q9P2N5 1060 aaKnown RBP15.67■□□□□ 0.1
EXT1-203ENST00000437196 PNMA2Q9UL42 364 aa15.67■□□□□ 0.1
EXT1-203ENST00000437196 PPP1R9AQ9ULJ8 1098 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms