RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 AATFQ9NY61 560 aaKnown RBP eCLIP8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.989e-7■■□□□ 13.6
GAPVD1-209ENST00000436712 CHPF2Q9P2E5 772 aa8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 TUBGCP4Q9UGJ1 667 aa8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 USP21Q9UK80 565 aa8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 CHMP3Q9Y3E7 222 aa8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 WNK3Q9BYP7 1800 aa8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 SLIT2O94813 1529 aa8.9□□□□□ -0.98
GAPVD1-209ENST00000436712 C5P01031 1676 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 RASSF10A6NK89 507 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 MYO1BO43795 1136 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 FAM200BP0CF97 657 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 CCT4P50991 539 aaKnown RBP8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 FOXD4Q12950 439 aaPredicted RBP8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 BTG3Q14201 252 aaPredicted RBP8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 ZNF790Q6PG37 636 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 LCA5Q86VQ0 697 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 TTC5Q8N0Z6 440 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 LSM14AQ8ND56 463 aaKnown RBP8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 ZSWIM4Q9H7M6 989 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 NOD2Q9HC29 1040 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 GALNT8Q9NY28 637 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 MTMR6Q9Y217 621 aa8.9□□□□□ -0.99
GAPVD1-209ENST00000436712 GPR75-ASB3A0A0A6YYF3 556 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 GOLGA6L4A6NEF3 574 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ABLIM1O14639 778 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 NPTXRO95502 500 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ANP32DO95626 131 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ATP6V1G2O95670 118 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 GNAI2P04899 355 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 IFIT2P09913 472 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 CCDC175P0C221 793 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 STIP1P31948 543 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 PDE1AP54750 535 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 STIM1Q13586 685 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 PROSER3Q2NL68 480 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 OLFML1Q6UWY5 402 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 UNC5CLQ8IV45 518 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 NEK9Q8TD19 979 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 TEKT4Q8WW24 435 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 SPIRE2Q8WWL2 714 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 CNKSR1Q969H4 720 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ZNF496Q96IT1 587 aaPredicted RBP8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 PCMTD2Q9NV79 361 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 HAUS2Q9NVX0 235 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ANO10Q9NW15 660 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 SWAP70Q9UH65 585 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 PPP2R2CQ9Y2T4 447 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ASB3Q9Y575 518 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 BZW2Q9Y6E2 419 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ADAMTS7Q9UKP4 1686 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 BCL9LQ86UU0 1499 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 SPATA31A5Q5VU36 1347 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 SPATA31A7Q8IWB4 1347 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 DISP2A7MBM2 1401 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 HMMRO75330 724 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ALDH3A1P30838 453 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 GGCXP38435 758 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 DDB1Q16531 1140 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 NAA35Q5VZE5 725 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 C6orf89Q6UWU4 347 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 COG1Q8WTW3 980 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 JAKMIP1Q96N16 626 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 BPIFA3Q9BQP9 254 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 SLC5A4Q9NY91 659 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 ATXN10Q9UBB4 475 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 CDC23Q9UJX2 597 aa8.89□□□□□ -0.99
GAPVD1-209ENST00000436712 NWD2Q9ULI1 1742 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 AFF2P51816 1311 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 STXBP3O00186 592 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 MYL6BP14649 208 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 HOXA10P31260 410 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 HSPA4P34932 840 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 FLT3P36888 993 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 ME3Q16798 604 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 CCDC121Q6ZUS5 278 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 TEX9Q8N6V9 391 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 ERMNQ8TAM6 284 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 MAIP1Q8WWC4 291 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 RIN2Q8WYP3 895 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 LZICQ8WZA0 190 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 USP44Q9H0E7 712 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 NOP53Q9NZM5 478 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 C2CD2Q9Y426 696 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 LRRD1A4D1F6 860 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 RHOXF2BP0C7M4 288 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 MCM3P25205 808 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 PSMC4P43686 418 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 AIMP1Q12904 312 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 WHAMMP3Q1A5X7 153 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 MPHOSPH6Q99547 160 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 RHOXF2Q9BQY4 288 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 SCAND2PQ9GZW5 306 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 PUF60Q9UHX1 559 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 TMCO1Q9UM00 188 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 RABL2BQ9UNT1 228 aa8.88□□□□□ -0.99
GAPVD1-209ENST00000436712 SPATA31A6Q5VVP1 1343 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1360.2 ms