RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 GTF2A2P52657 109 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 ANKRD1Q15327 319 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 ME3Q16798 604 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 TTBK2Q6IQ55 1244 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 SYNE3Q6ZMZ3 975 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 C12orf42Q96LP6 360 aa19.61■□□□□ 0.73
CALD1-209ENST00000436461 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
CALD1-209ENST00000436461 NCOA5Q9HCD5 579 aaKnown RBP19.61■□□□□ 0.73
CALD1-209ENST00000436461 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
CALD1-209ENST00000436461 DDAH1O94760 285 aa19.6■□□□□ 0.73
CALD1-209ENST00000436461 SNHG28P0DPA3 235 aa19.6■□□□□ 0.73
CALD1-209ENST00000436461 EVCP57679 992 aa19.6■□□□□ 0.73
CALD1-209ENST00000436461 SAMD1Q6SPF0 538 aaPredicted RBP19.6■□□□□ 0.73
CALD1-209ENST00000436461 CMTR1Q8N1G2 835 aaKnown RBP19.6■□□□□ 0.73
CALD1-209ENST00000436461 NECAB1Q8N987 351 aa19.6■□□□□ 0.73
CALD1-209ENST00000436461 SYNPO2Q9UMS6 1093 aa19.6■□□□□ 0.73
CALD1-209ENST00000436461 BAZ2BQ9UIF8 2168 aaKnown RBP19.59■□□□□ 0.73
CALD1-209ENST00000436461 GOLGA8AA7E2F4 631 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 BMP3P12645 472 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 CDC27P30260 824 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 METAP2P50579 478 aaKnown RBP eCLIP19.59■□□□□ 0.73
CALD1-209ENST00000436461 GRM4Q14833 912 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 GPAT2Q6NUI2 795 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 LPAR1Q92633 364 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 GMCL1Q96IK5 515 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 PTPN18Q99952 460 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 TANGO6Q9C0B7 1094 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 FBXO28Q9NVF7 368 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 MAD2L2Q9UI95 211 aa19.59■□□□□ 0.73
CALD1-209ENST00000436461 WDR46O15213 610 aaKnown RBP19.58■□□□□ 0.73
CALD1-209ENST00000436461 PPFIA3O75145 1194 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 PARP1P09874 1014 aaKnown RBP19.58■□□□□ 0.73
CALD1-209ENST00000436461 CETPP11597 493 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 SLC16A2P36021 539 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 VEGFBP49765 207 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 KIF23Q02241 960 aaPredicted RBP19.58■□□□□ 0.73
CALD1-209ENST00000436461 ZNF543Q08ER8 600 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 FANCBQ8NB91 859 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 DCAF4Q8WV16 495 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 UBA5Q9GZZ9 404 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 LIMCH1Q9UPQ0 1083 aa19.58■□□□□ 0.73
CALD1-209ENST00000436461 WDR33Q9C0J8 1336 aaKnown RBP19.58■□□□□ 0.72
CALD1-209ENST00000436461 RLFQ13129 1914 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 BTBD19C9JJ37 291 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 TMEM232C9JQI7 657 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 PLEKHA8P1O95397 391 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 ADD1P35611 737 aaKnown RBP19.58■□□□□ 0.72
CALD1-209ENST00000436461 ST3GAL1Q11201 340 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 SCRN1Q12765 414 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 RTN1Q16799 776 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 NBPF11Q86T75 865 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.72
CALD1-209ENST00000436461 PROCA1Q8NCQ7 364 aaPredicted RBP19.58■□□□□ 0.72
CALD1-209ENST00000436461 CTCFLQ8NI51 663 aaPredicted RBP19.58■□□□□ 0.72
CALD1-209ENST00000436461 ZNF274Q96GC6 653 aaPredicted RBP19.58■□□□□ 0.72
CALD1-209ENST00000436461 FAM217BQ9NTX9 383 aaPredicted RBP19.58■□□□□ 0.72
CALD1-209ENST00000436461 PALM3A6NDB9 673 aaPredicted RBP19.57■□□□□ 0.72
CALD1-209ENST00000436461 FASTKD5Q7L8L6 764 aaKnown RBP19.57■□□□□ 0.72
CALD1-209ENST00000436461 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
CALD1-209ENST00000436461 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
CALD1-209ENST00000436461 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
CALD1-209ENST00000436461 MANSC4A6NHS7 340 aaPredicted RBP19.56■□□□□ 0.72
CALD1-209ENST00000436461 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
CALD1-209ENST00000436461 CALM1P0DP23 149 aa19.56■□□□□ 0.72
CALD1-209ENST00000436461 CALM2P0DP24 149 aa19.56■□□□□ 0.72
CALD1-209ENST00000436461 CALM3P0DP25 149 aa19.56■□□□□ 0.72
CALD1-209ENST00000436461 IKQ13123 557 aaPredicted RBP19.56■□□□□ 0.72
CALD1-209ENST00000436461 SLC35G1Q2M3R5 365 aa19.56■□□□□ 0.72
CALD1-209ENST00000436461 TMX3Q96JJ7 454 aa19.56■□□□□ 0.72
CALD1-209ENST00000436461 KLRF2D3W0D1 207 aa19.55■□□□□ 0.72
CALD1-209ENST00000436461 FLOT1O75955 427 aa19.55■□□□□ 0.72
CALD1-209ENST00000436461 NOGQ13253 232 aa19.55■□□□□ 0.72
CALD1-209ENST00000436461 ASPRV1Q53RT3 343 aa19.55■□□□□ 0.72
CALD1-209ENST00000436461 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
CALD1-209ENST00000436461 CCDC83Q8IWF9 413 aa19.55■□□□□ 0.72
CALD1-209ENST00000436461 COL11A1P12107 1806 aaPredicted RBP19.55■□□□□ 0.72
CALD1-209ENST00000436461 TESPA1A2RU30 521 aaPredicted RBP19.54■□□□□ 0.72
CALD1-209ENST00000436461 PDHXO00330 501 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 PFKFB2O60825 505 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 SNAP25P60880 206 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 SRBD1Q8N5C6 995 aaKnown RBP19.54■□□□□ 0.72
CALD1-209ENST00000436461 PIBF1Q8WXW3 757 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 KIFC2Q96AC6 838 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 NID2Q14112 1375 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 CYTH3O43739 400 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 PEX10O60683 326 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 CYP2C8P10632 490 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 KIF5BP33176 963 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 STAT2P52630 851 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
CALD1-209ENST00000436461 GPATCH4Q5T3I0 446 aaKnown RBP19.54■□□□□ 0.72
CALD1-209ENST00000436461 GTF3C6Q969F1 213 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms