RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-214ENST00000435747 MAML3Q96JK9 1138 aa12.78□□□□□ -0.36
CPNE1-214ENST00000435747 MOV10L1Q9BXT6 1211 aaKnown RBP12.78□□□□□ -0.36
CPNE1-214ENST00000435747 SIL1Q9H173 461 aa12.78□□□□□ -0.36
CPNE1-214ENST00000435747 DHX36Q9H2U1 1008 aaKnown RBP12.78□□□□□ -0.36
CPNE1-214ENST00000435747 CERS4Q9HA82 394 aa12.78□□□□□ -0.36
CPNE1-214ENST00000435747 FAM186AA6NE01 2351 aa12.78□□□□□ -0.36
CPNE1-214ENST00000435747 ZBBXA8MT70 800 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
CPNE1-214ENST00000435747 DCXO43602 365 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 ADAMTS4O75173 837 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 AKR1A1P14550 325 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 IL15P40933 162 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-214ENST00000435747 USP14P54578 494 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.37
CPNE1-214ENST00000435747 MECOMQ03112 1051 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 ERICH6Q7L0X2 663 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 GLT1D1Q96MS3 346 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.37
CPNE1-214ENST00000435747 EPOPA6NHQ4 379 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 CA3P07451 260 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 LDHCP07864 332 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 GNAI3P08754 354 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 ATP2A2P16615 1042 aaKnown RBP12.76□□□□□ -0.37
CPNE1-214ENST00000435747 VCAM1P19320 739 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 ERCC3P19447 782 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 CDK7P50613 346 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 VTI1AQ96AJ9 217 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-214ENST00000435747 DNAJC18Q9H819 358 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 ELP1O95163 1332 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 ZBED9Q6R2W3 1325 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 EPG5Q9HCE0 2579 aa12.76□□□□□ -0.37
CPNE1-214ENST00000435747 IPO8O15397 1037 aaKnown RBP12.75□□□□□ -0.37
CPNE1-214ENST00000435747 ADORA1P30542 326 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 GSTO1P78417 241 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 KCNA10Q16322 511 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 SAMD1Q6SPF0 538 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-214ENST00000435747 FOXP4Q8IVH2 680 aaPredicted RBP12.75□□□□□ -0.37
CPNE1-214ENST00000435747 ABRAQ8N0Z2 381 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 MFSD14AQ96MC6 490 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 SPATC1LQ9H0A9 340 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 SYNRGQ9UMZ2 1314 aa12.75□□□□□ -0.37
CPNE1-214ENST00000435747 PDS5AQ29RF7 1337 aaKnown RBP12.74□□□□□ -0.37
CPNE1-214ENST00000435747 PNMA6EA0A0J9YXQ4 647 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 A0A0U1RQG5 324 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-214ENST00000435747 ARVCFO00192 962 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 SRGAP3O43295 1099 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 GH2P01242 217 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 TAL1P17542 331 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-214ENST00000435747 PTPN5P54829 565 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 CCDC102BQ68D86 513 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 HFE2Q6ZVN8 426 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 TMEM57Q8N5G2 664 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 KLHDC9Q8NEP7 349 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 FRAT1Q92837 279 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-214ENST00000435747 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
CPNE1-214ENST00000435747 RPAP3Q9H6T3 665 aaPredicted RBP12.74□□□□□ -0.37
CPNE1-214ENST00000435747 TPRP12270 2363 aaKnown RBP12.73□□□□□ -0.37
CPNE1-214ENST00000435747 GFRA3O60609 400 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 RLBP1P12271 317 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 FCER1AP12319 257 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 GRB10Q13322 594 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 POLA2Q14181 598 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 PLS1Q14651 629 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
CPNE1-214ENST00000435747 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
CPNE1-214ENST00000435747 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 ANKS1AQ92625 1134 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 TINF2Q9BSI4 451 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 KIAA1683Q9H0B3 1180 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 MROH8Q9H579 483 aa12.73□□□□□ -0.37
CPNE1-214ENST00000435747 UBE2ZQ9H832 354 aaPredicted RBP12.73□□□□□ -0.37
CPNE1-214ENST00000435747 TECTAO75443 2155 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 GNAI2P04899 355 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 ZNF865P0CJ78 1059 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-214ENST00000435747 IL9P15248 144 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 CCL23P55773 120 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 TIMM10P62072 90 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 TFCP2Q12800 502 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 CCSAPQ6IQ19 270 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-214ENST00000435747 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 PCSK9Q8NBP7 692 aaKnown RBP12.72□□□□□ -0.37
CPNE1-214ENST00000435747 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
CPNE1-214ENST00000435747 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
CPNE1-214ENST00000435747 HOXC10Q9NYD6 342 aa12.72□□□□□ -0.37
CPNE1-214ENST00000435747 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms