RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 GBA2Q9HCG7 927 aaPredicted RBP30.75■■■□□ 2.51
TMEM248-205ENST00000433271 PPFIA3O75145 1194 aa30.74■■■□□ 2.51
TMEM248-205ENST00000433271 SSRP1Q08945 709 aaKnown RBP30.74■■■□□ 2.51
TMEM248-205ENST00000433271 C2orf69Q8N8R5 385 aa30.74■■■□□ 2.51
TMEM248-205ENST00000433271 ORC3Q9UBD5 711 aaPredicted RBP30.74■■■□□ 2.51
TMEM248-205ENST00000433271 AFG3L2Q9Y4W6 797 aa30.74■■■□□ 2.51
TMEM248-205ENST00000433271 FRMPD2Q68DX3 1309 aaPredicted RBP30.74■■■□□ 2.51
TMEM248-205ENST00000433271 FMNL1O95466 1100 aaPredicted RBP30.73■■■□□ 2.51
TMEM248-205ENST00000433271 SMARCA1P28370 1054 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 BACE1P56817 501 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 CCDC96Q2M329 555 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 TRIM22Q8IYM9 498 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 CLMNQ96JQ2 1002 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 STK36Q9NRP7 1315 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 FDPSP14324 419 aaKnown RBP30.73■■■□□ 2.51
TMEM248-205ENST00000433271 USP14P54578 494 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 MTMR2Q13614 643 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 KIAA1755Q5JYT7 1200 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 ERO1BQ86YB8 467 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 SPICE1Q8N0Z3 855 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 FAM184AQ8NB25 1140 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 LPAR1Q92633 364 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 SLC26A6Q9BXS9 759 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 RNF26Q9BY78 433 aaPredicted RBP30.73■■■□□ 2.51
TMEM248-205ENST00000433271 ELP3Q9H9T3 547 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 KIF3AQ9Y496 699 aa30.73■■■□□ 2.51
TMEM248-205ENST00000433271 BMP3P12645 472 aa30.72■■■□□ 2.51
TMEM248-205ENST00000433271 ZYXQ15942 572 aaKnown RBP30.72■■■□□ 2.51
TMEM248-205ENST00000433271 KCTD1Q719H9 257 aa30.72■■■□□ 2.51
TMEM248-205ENST00000433271 GPCPD1Q9NPB8 672 aa30.72■■■□□ 2.51
TMEM248-205ENST00000433271 PHIPQ8WWQ0 1821 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 SPDYE5A6NIY4 337 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 TRIM75PA6NK02 468 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 C19orf81C9J6K1 198 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 PPATQ06203 517 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 CST9Q5W186 159 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 SMC1BQ8NDV3 1235 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 SPZ1Q9BXG8 430 aa30.71■■■□□ 2.51
TMEM248-205ENST00000433271 PRPF3O43395 683 aaKnown RBP30.7■■■□□ 2.51
TMEM248-205ENST00000433271 YY1P25490 414 aa30.7■■■□□ 2.51
TMEM248-205ENST00000433271 RBM46Q8TBY0 533 aaKnown RBP30.7■■■□□ 2.51
TMEM248-205ENST00000433271 NUP88Q99567 741 aaPredicted RBP30.7■■■□□ 2.51
TMEM248-205ENST00000433271 CNTNAP5Q8WYK1 1306 aa30.7■■■□□ 2.5
TMEM248-205ENST00000433271 PDCP20941 246 aa30.69■■■□□ 2.5
TMEM248-205ENST00000433271 CIZ1Q9ULV3 898 aaPredicted RBP30.69■■■□□ 2.5
TMEM248-205ENST00000433271 V9GY48 417 aaPredicted RBP30.69■■■□□ 2.5
TMEM248-205ENST00000433271 CYTH3O43739 400 aa30.69■■■□□ 2.5
TMEM248-205ENST00000433271 AKAP17AQ02040 695 aaKnown RBP30.69■■■□□ 2.5
TMEM248-205ENST00000433271 SLC35G1Q2M3R5 365 aa30.69■■■□□ 2.5
TMEM248-205ENST00000433271 CNKSR2Q8WXI2 1034 aa30.69■■■□□ 2.5
TMEM248-205ENST00000433271 UBA5Q9GZZ9 404 aa30.69■■■□□ 2.5
TMEM248-205ENST00000433271 EMILIN3Q9NT22 766 aa30.69■■■□□ 2.5
TMEM248-205ENST00000433271 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.69■■■□□ 2.5
TMEM248-205ENST00000433271 RBM27Q9P2N5 1060 aaKnown RBP30.69■■■□□ 2.5
TMEM248-205ENST00000433271 PASKQ96RG2 1323 aa30.68■■■□□ 2.5
TMEM248-205ENST00000433271 DEXIO95424 95 aa30.68■■■□□ 2.5
TMEM248-205ENST00000433271 LARP1BQ659C4 914 aaKnown RBP30.68■■■□□ 2.5
TMEM248-205ENST00000433271 TTBK2Q6IQ55 1244 aa30.68■■■□□ 2.5
TMEM248-205ENST00000433271 SLC10A4Q96EP9 437 aa30.68■■■□□ 2.5
TMEM248-205ENST00000433271 RIOX1Q9H6W3 641 aa30.68■■■□□ 2.5
TMEM248-205ENST00000433271 ISY1Q9ULR0 285 aaKnown RBP30.68■■■□□ 2.5
TMEM248-205ENST00000433271 FAM83BQ5T0W9 1011 aa30.67■■■□□ 2.5
TMEM248-205ENST00000433271 WASF1Q92558 559 aa30.67■■■□□ 2.5
TMEM248-205ENST00000433271 OTUD5Q96G74 571 aa30.67■■■□□ 2.5
TMEM248-205ENST00000433271 CPVLQ9H3G5 476 aa30.67■■■□□ 2.5
TMEM248-205ENST00000433271 WDR46O15213 610 aaKnown RBP30.66■■■□□ 2.5
TMEM248-205ENST00000433271 TOMM70O94826 608 aa30.66■■■□□ 2.5
TMEM248-205ENST00000433271 PDIA4P13667 645 aaKnown RBP30.66■■■□□ 2.5
TMEM248-205ENST00000433271 SYT1P21579 422 aa30.66■■■□□ 2.5
TMEM248-205ENST00000433271 C12orf42Q96LP6 360 aa30.66■■■□□ 2.5
TMEM248-205ENST00000433271 TRPM7Q96QT4 1865 aa30.66■■■□□ 2.5
TMEM248-205ENST00000433271 PPIL2Q13356 520 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 SH3D19Q5HYK7 790 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 BTNL9Q6UXG8 535 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 OPTNQ96CV9 577 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 CHMP5Q9NZZ3 219 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 BAZ2BQ9UIF8 2168 aaKnown RBP30.65■■■□□ 2.5
TMEM248-205ENST00000433271 TMEM232C9JQI7 657 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 CXCL11O14625 94 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 PLA2G6O60733 806 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 SLC16A2P36021 539 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 HMGCS2P54868 508 aa30.65■■■□□ 2.5
TMEM248-205ENST00000433271 IRF6O14896 467 aa30.64■■■□□ 2.5
TMEM248-205ENST00000433271 PKN1Q16512 942 aa30.64■■■□□ 2.5
TMEM248-205ENST00000433271 ADGRF4Q8IZF3 695 aa30.64■■■□□ 2.5
TMEM248-205ENST00000433271 ZNF784Q8NCA9 323 aaPredicted RBP30.64■■■□□ 2.5
TMEM248-205ENST00000433271 TMOD4Q9NZQ9 345 aa30.64■■■□□ 2.5
TMEM248-205ENST00000433271 hCG_1642624A0A1W2PR95 340 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 VCAM1P19320 739 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 STAT2P52630 851 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 NUCB2P80303 420 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 DGKZQ13574 1117 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 RRP36Q96EU6 259 aaKnown RBP30.63■■■□□ 2.49
TMEM248-205ENST00000433271 ALG1Q9BT22 464 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 VAT1LQ9HCJ6 419 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 KCNH4Q9UQ05 1017 aa30.63■■■□□ 2.49
TMEM248-205ENST00000433271 STX6O43752 255 aa30.62■■■□□ 2.49
TMEM248-205ENST00000433271 CHURC1Q8WUH1 139 aa30.62■■■□□ 2.49
TMEM248-205ENST00000433271 JMJD4Q9H9V9 463 aa30.62■■■□□ 2.49
TMEM248-205ENST00000433271 FEM1BQ9UK73 627 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms