RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 SPG7Q9UQ90 795 aa8.7□□□□□ -1.02
TTR-202ENST00000432547 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
TTR-202ENST00000432547 SIPA1L3O60292 1781 aaPredicted RBP8.69□□□□□ -1.02
TTR-202ENST00000432547 UBR2Q8IWV8 1755 aa8.69□□□□□ -1.02
TTR-202ENST00000432547 FAM95CA0A1B0GW59 222 aa8.69□□□□□ -1.02
TTR-202ENST00000432547 ESRRAP11474 423 aaPredicted RBP8.69□□□□□ -1.02
TTR-202ENST00000432547 EIF4A2Q14240 407 aaKnown RBP8.69□□□□□ -1.02
TTR-202ENST00000432547 PIGBQ92521 554 aa8.69□□□□□ -1.02
TTR-202ENST00000432547 SMARCC1Q92922 1105 aaPredicted RBP8.69□□□□□ -1.02
TTR-202ENST00000432547 OSBPL1AQ9BXW6 950 aa8.69□□□□□ -1.02
TTR-202ENST00000432547 GZF1Q9H116 711 aaPredicted RBP8.69□□□□□ -1.02
TTR-202ENST00000432547 SOX17Q9H6I2 414 aaPredicted RBP8.69□□□□□ -1.02
TTR-202ENST00000432547 KIF7Q2M1P5 1343 aa8.69□□□□□ -1.02
TTR-202ENST00000432547 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
TTR-202ENST00000432547 TNFRSF21O75509 655 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 PHKG2P15735 406 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 FLAD1Q8NFF5 587 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 NLGN2Q8NFZ4 835 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 PMEPA1Q969W9 287 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 PANK3Q9H999 370 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 CYP4F12Q9HCS2 524 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 PRKAG2Q9UGJ0 569 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 FOXD3Q9UJU5 478 aaPredicted RBP8.68□□□□□ -1.02
TTR-202ENST00000432547 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
TTR-202ENST00000432547 AFDNP55196 1824 aaKnown RBP8.68□□□□□ -1.02
TTR-202ENST00000432547 METTL12A8MUP2 240 aa8.67□□□□□ -1.02
TTR-202ENST00000432547 KDRP35968 1356 aa8.67□□□□□ -1.02
TTR-202ENST00000432547 RBM25P49756 843 aaKnown RBP8.67□□□□□ -1.02
TTR-202ENST00000432547 MTMR3Q13615 1198 aa8.67□□□□□ -1.02
TTR-202ENST00000432547 CPSF6Q16630 551 aaKnown RBP eCLIP8.67□□□□□ -1.02
TTR-202ENST00000432547 EXOSC6Q5RKV6 272 aaKnown RBP8.67□□□□□ -1.02
TTR-202ENST00000432547 OGFOD2Q6N063 350 aa8.67□□□□□ -1.02
TTR-202ENST00000432547 RETREG2Q8NC44 543 aa8.67□□□□□ -1.02
TTR-202ENST00000432547 EZH1Q92800 747 aaPredicted RBP8.67□□□□□ -1.02
TTR-202ENST00000432547 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
TTR-202ENST00000432547 ANGEL1Q9UNK9 670 aaKnown RBP8.67□□□□□ -1.02
TTR-202ENST00000432547 KDM6AO15550 1401 aaPredicted RBP8.66□□□□□ -1.02
TTR-202ENST00000432547 CTSBP07858 339 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 TNNT2P45379 298 aaPredicted RBP8.66□□□□□ -1.02
TTR-202ENST00000432547 GPR162Q16538 588 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 ZAR1Q86SH2 424 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 GTF3C2Q8WUA4 911 aaPredicted RBP8.66□□□□□ -1.02
TTR-202ENST00000432547 CCDC97Q96F63 343 aaPredicted RBP8.66□□□□□ -1.02
TTR-202ENST00000432547 TMOD3Q9NYL9 352 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 SBF1O95248 1867 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
TTR-202ENST00000432547 FAM170BA6NMN3 283 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 PCSK2P16519 638 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 ITGB5P18084 799 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 SSFA2P28290 1259 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 SOX4Q06945 474 aaPredicted RBP8.65□□□□□ -1.02
TTR-202ENST00000432547 PAOXQ6QHF9 649 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 LINC00116Q8NCU8 138 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 GIMAP7Q8NHV1 300 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
TTR-202ENST00000432547 MRC1P22897 1456 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 ERVV-2B6SEH9 535 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 PHACTR2O75167 634 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 USP11P51784 963 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 JAG1P78504 1218 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 ITPK1Q13572 414 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 CD2APQ9Y5K6 639 aa8.64□□□□□ -1.03
TTR-202ENST00000432547 NRXN2Q9P2S2 1712 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 DLG5Q8TDM6 1919 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
TTR-202ENST00000432547 EDN3P14138 238 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 NPR3P17342 541 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 GSTM4Q03013 218 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 SMIM5Q71RC9 77 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 MORC1Q86VD1 984 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
TTR-202ENST00000432547 CACNA1SQ13698 1873 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 CYP26A1O43174 497 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 GRIN3BO60391 1043 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 ADH5P11766 374 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 PLEKHO1Q53GL0 409 aaPredicted RBP8.62□□□□□ -1.03
TTR-202ENST00000432547 FBXL18Q96ME1 805 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 METTL22Q9BUU2 404 aaPredicted RBP8.62□□□□□ -1.03
TTR-202ENST00000432547 PAK6Q9NQU5 681 aaPredicted RBP8.62□□□□□ -1.03
TTR-202ENST00000432547 BSDC1Q9NW68 430 aaPredicted RBP8.62□□□□□ -1.03
TTR-202ENST00000432547 KNSTRNQ9Y448 316 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 ACTL7BQ9Y614 415 aa8.62□□□□□ -1.03
TTR-202ENST00000432547 FZD6O60353 706 aa8.61□□□□□ -1.03
TTR-202ENST00000432547 ZNF423Q2M1K9 1284 aa8.61□□□□□ -1.03
TTR-202ENST00000432547 ZNF530Q6P9A1 599 aaPredicted RBP8.61□□□□□ -1.03
TTR-202ENST00000432547 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
TTR-202ENST00000432547 TP53INP2Q8IXH6 220 aa8.61□□□□□ -1.03
TTR-202ENST00000432547 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
TTR-202ENST00000432547 CEP350Q5VT06 3117 aa8.6□□□□□ -1.03
TTR-202ENST00000432547 KCPQ6ZWJ8 1503 aa8.6□□□□□ -1.03
TTR-202ENST00000432547 CNTNAP4Q9C0A0 1308 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms