RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 OR8K1Q8NGG5 319 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 P3H4Q92791 437 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 ENC1O14682 589 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 RPS6KA2Q15349 733 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 PTPN21Q16825 1174 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 USP19O94966 1318 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 EYA2O00167 538 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 GUCY2DQ02846 1103 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 KBTBD3Q8NAB2 608 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 NUCKS1Q9H1E3 243 aaKnown RBP12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 KRT81Q14533 505 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 CERS3Q8IU89 383 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 SEPT10Q9P0V9 454 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 PYCARDQ9ULZ3 195 aa12.9□□□□□ -0.34
RIMKLA-202ENST00000431473 SBNO1A3KN83 1393 aa12.9□□□□□ -0.35
RIMKLA-202ENST00000431473 MX2P20592 715 aa12.9□□□□□ -0.35
RIMKLA-202ENST00000431473 REXO1Q8N1G1 1221 aaKnown RBP12.9□□□□□ -0.35
RIMKLA-202ENST00000431473 GABPB2Q8TAK5 448 aaPredicted RBP12.9□□□□□ -0.35
RIMKLA-202ENST00000431473 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 GNA14O95837 355 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 FAM47AQ5JRC9 791 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 CXorf38Q8TB03 319 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 TRIM35Q9UPQ4 493 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SLC12A2P55011 1212 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SMIM24O75264 130 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SETSIPP0DME0 302 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SLC1A4P43007 532 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 TCP10Q12799 353 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 TPCN1Q9ULQ1 816 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SAT1P21673 171 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 STAT1P42224 750 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 HOMER3Q9NSC5 361 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 HYOU1Q9Y4L1 999 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 UFL1O94874 794 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 TTC6Q86TZ1 520 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 MRPL46Q9H2W6 279 aaKnown RBP12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 YTHDC2Q9H6S0 1430 aaKnown RBP12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
RIMKLA-202ENST00000431473 CD19P15391 556 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 NONOQ15233 471 aaKnown RBP eCLIP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 DDB1Q16531 1140 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 EDC3Q96F86 508 aaKnown RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 RRP15Q9Y3B9 282 aaKnown RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 LUC7L3O95232 432 aaKnown RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 RASSF7Q02833 373 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 NAA35Q5VZE5 725 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 SPATS2Q86XZ4 545 aaKnown RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 IRX4P78413 519 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PTH1RQ03431 593 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PHLDB3Q6NSJ2 640 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 GPBP1Q86WP2 473 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 HOXC9P31274 260 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PRPF6O94906 941 aaKnown RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 TESK2Q96S53 571 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 NACA2Q9H009 215 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 XAB2Q9HCS7 855 aaKnown RBP12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 ZAP70P43403 619 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 PANK4Q9NVE7 773 aa12.88□□□□□ -0.35
RIMKLA-202ENST00000431473 HIBADHP31937 336 aaKnown RBP12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 SPECC1L-ADORA2AF8WAN1 911 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 BANK1Q8NDB2 785 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 TGFBRAP1Q8WUH2 860 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 C8orf37Q96NL8 207 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 VCX3AQ9NNX9 186 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 TNRQ92752 1358 aa12.87□□□□□ -0.35
RIMKLA-202ENST00000431473 IFNAR2P48551 515 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 896.2 ms