RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 NBPF12Q5TAG4 269 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-206ENST00000431390 CLEC10AQ8IUN9 316 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 SULF1Q8IWU6 871 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 WASF1Q92558 559 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 PHKBQ93100 1093 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 SLC26A6Q9BXS9 759 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 MAD2L2Q9UI95 211 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 ZBTB21Q9ULJ3 1066 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 PALM3A6NDB9 673 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-206ENST00000431390 TRPA1O75762 1119 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 PLEKHA8P1O95397 391 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 SLC10A3P09131 477 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 SNHG28P0DPA3 235 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 EEF2P13639 858 aaKnown RBP21.15■□□□□ 0.98
HMGN1-206ENST00000431390 JAG1P78504 1218 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 LRRC47Q8N1G4 583 aaKnown RBP21.15■□□□□ 0.98
HMGN1-206ENST00000431390 LZTS2Q9BRK4 669 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 RNF186Q9NXI6 227 aa21.15■□□□□ 0.98
HMGN1-206ENST00000431390 VPS37CA5D8V6 355 aaPredicted RBP21.14■□□□□ 0.98
HMGN1-206ENST00000431390 PPFIA3O75145 1194 aa21.14■□□□□ 0.98
HMGN1-206ENST00000431390 DEXIO95424 95 aa21.14■□□□□ 0.98
HMGN1-206ENST00000431390 ASNSP08243 561 aa21.14■□□□□ 0.98
HMGN1-206ENST00000431390 CLEC17AQ6ZS10 378 aa21.14■□□□□ 0.98
HMGN1-206ENST00000431390 CDCA5Q96FF9 252 aa21.14■□□□□ 0.98
HMGN1-206ENST00000431390 ZNF341Q9BYN7 854 aa21.14■□□□□ 0.98
HMGN1-206ENST00000431390 CNTNAP5Q8WYK1 1306 aa21.14■□□□□ 0.97
HMGN1-206ENST00000431390 H3BQV1 296 aa21.14■□□□□ 0.97
HMGN1-206ENST00000431390 PRPF3O43395 683 aaKnown RBP21.14■□□□□ 0.97
HMGN1-206ENST00000431390 PARP1P09874 1014 aaKnown RBP21.14■□□□□ 0.97
HMGN1-206ENST00000431390 PDHBP11177 359 aa21.14■□□□□ 0.97
HMGN1-206ENST00000431390 ATP2B2Q01814 1243 aa21.14■□□□□ 0.97
HMGN1-206ENST00000431390 SUPT20HL1Q3ZLR7 823 aa21.14■□□□□ 0.97
HMGN1-206ENST00000431390 SIAH1Q8IUQ4 282 aa21.14■□□□□ 0.97
HMGN1-206ENST00000431390 SRBD1Q8N5C6 995 aaKnown RBP21.14■□□□□ 0.97
HMGN1-206ENST00000431390 DOCK1Q14185 1865 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 PAPPA2Q9BXP8 1791 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 CTNND1O60716 968 aaKnown RBP21.13■□□□□ 0.97
HMGN1-206ENST00000431390 F13A1P00488 732 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 SMARCA1P28370 1054 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 SOX10P56693 466 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 AKAP17AQ02040 695 aaKnown RBP21.13■□□□□ 0.97
HMGN1-206ENST00000431390 ASPRV1Q53RT3 343 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 CMTR1Q8N1G2 835 aaKnown RBP21.13■□□□□ 0.97
HMGN1-206ENST00000431390 STAG2Q8N3U4 1231 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 C8orf76Q96K31 380 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 RBM27Q9P2N5 1060 aaKnown RBP21.13■□□□□ 0.97
HMGN1-206ENST00000431390 ZNF112Q9UJU3 913 aa21.13■□□□□ 0.97
HMGN1-206ENST00000431390 CCDC82Q8N4S0 544 aa21.12■□□□□ 0.97
HMGN1-206ENST00000431390 GMCL1P1Q8NEA9 526 aa21.12■□□□□ 0.97
HMGN1-206ENST00000431390 GBP4Q96PP9 640 aa21.12■□□□□ 0.97
HMGN1-206ENST00000431390 ALG1Q9BT22 464 aa21.12■□□□□ 0.97
HMGN1-206ENST00000431390 ARHGEF10LQ9HCE6 1279 aa21.12■□□□□ 0.97
HMGN1-206ENST00000431390 SSC5DA1L4H1 1573 aa21.11■□□□□ 0.97
HMGN1-206ENST00000431390 USP17L5A8MUK1 530 aa21.11■□□□□ 0.97
HMGN1-206ENST00000431390 FBXO18Q8NFZ0 1043 aa21.11■□□□□ 0.97
HMGN1-206ENST00000431390 SPZ1Q9BXG8 430 aa21.11■□□□□ 0.97
HMGN1-206ENST00000431390 MTMR7Q9Y216 660 aa21.11■□□□□ 0.97
HMGN1-206ENST00000431390 ATP6V1DQ9Y5K8 247 aa21.11■□□□□ 0.97
HMGN1-206ENST00000431390 PDE4DIPQ5VU43 2346 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 KLRF2D3W0D1 207 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 GPATCH4Q5T3I0 446 aaKnown RBP21.1■□□□□ 0.97
HMGN1-206ENST00000431390 FOXD4L5Q5VV16 416 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-206ENST00000431390 USP17L2Q6R6M4 530 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 RASAL3Q86YV0 1011 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 DCAF4Q8WV16 495 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 FOXD4L4Q8WXT5 416 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-206ENST00000431390 ZNF543Q08ER8 600 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 SH2D4AQ9H788 454 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 TMX2Q9Y320 296 aa21.1■□□□□ 0.97
HMGN1-206ENST00000431390 V9GY48 417 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-206ENST00000431390 TRIM29Q14134 588 aa21.09■□□□□ 0.97
HMGN1-206ENST00000431390 PKN1Q16512 942 aa21.09■□□□□ 0.97
HMGN1-206ENST00000431390 SLFN13Q68D06 897 aa21.09■□□□□ 0.97
HMGN1-206ENST00000431390 RASGRP2Q7LDG7 609 aa21.09■□□□□ 0.97
HMGN1-206ENST00000431390 GMCL1Q96IK5 515 aa21.09■□□□□ 0.97
HMGN1-206ENST00000431390 ZSCAN16Q9H4T2 348 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-206ENST00000431390 A0A1W2PRG0 241 aa21.08■□□□□ 0.97
HMGN1-206ENST00000431390 GOLGA8HP0CJ92 632 aa21.08■□□□□ 0.97
HMGN1-206ENST00000431390 AIFM3Q96NN9 605 aa21.08■□□□□ 0.97
HMGN1-206ENST00000431390 F5H6K3 240 aa21.07■□□□□ 0.96
HMGN1-206ENST00000431390 BAG4O95429 457 aaKnown RBP21.07■□□□□ 0.96
HMGN1-206ENST00000431390 FOSBP53539 338 aa21.07■□□□□ 0.96
HMGN1-206ENST00000431390 KLRC3Q07444 240 aa21.07■□□□□ 0.96
HMGN1-206ENST00000431390 SCYL3Q8IZE3 742 aa21.07■□□□□ 0.96
HMGN1-206ENST00000431390 WRNIP1Q96S55 665 aa21.07■□□□□ 0.96
HMGN1-206ENST00000431390 MYH15Q9Y2K3 1946 aa21.07■□□□□ 0.96
HMGN1-206ENST00000431390 BAZ2BQ9UIF8 2168 aaKnown RBP21.07■□□□□ 0.96
HMGN1-206ENST00000431390 UBE2Q2LH0YL09 131 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 CYTH3O43739 400 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 XBP1P17861 261 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 INPP5BP32019 993 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 NFKBIBQ15653 356 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 PFKFB3Q16875 520 aaPredicted RBP21.06■□□□□ 0.96
HMGN1-206ENST00000431390 KRT40Q6A162 431 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 MOB2Q70IA6 237 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 CTU1Q7Z7A3 348 aaKnown RBP21.06■□□□□ 0.96
HMGN1-206ENST00000431390 RIOX1Q9H6W3 641 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 GOPCQ9HD26 462 aa21.06■□□□□ 0.96
HMGN1-206ENST00000431390 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms