RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 INHBEP58166 350 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 GRM4Q14833 912 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
CHD4-202ENST00000430771 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 TANGO6Q9C0B7 1094 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 RPAP3Q9H6T3 665 aaPredicted RBP12.84□□□□□ -0.35
CHD4-202ENST00000430771 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
CHD4-202ENST00000430771 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 RBM28Q9NW13 759 aaKnown RBP12.84□□□□□ -0.35
CHD4-202ENST00000430771 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
CHD4-202ENST00000430771 CCDC196A0A1B0GTZ2 297 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
CHD4-202ENST00000430771 GNAQP50148 359 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 STAT2P52630 851 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 EVCP57679 992 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
CHD4-202ENST00000430771 ZNF543Q08ER8 600 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 TROAPQ12815 778 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 DGKZQ13574 1117 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 PPP2R5BQ15173 497 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 RTN1Q16799 776 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 ANKRD23Q86SG2 305 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 BRI3BPQ8WY22 251 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 CHMP4CQ96CF2 233 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
CHD4-202ENST00000430771 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 MYL10Q9BUA6 226 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
CHD4-202ENST00000430771 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
CHD4-202ENST00000430771 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
CHD4-202ENST00000430771 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 RXRAP19793 462 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 OSBPP22059 807 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
CHD4-202ENST00000430771 TREML2Q5T2D2 321 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 FAM160B2Q86V87 743 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 GTF3C2Q8WUA4 911 aaPredicted RBP12.82□□□□□ -0.36
CHD4-202ENST00000430771 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
CHD4-202ENST00000430771 PARK7Q99497 189 aaKnown RBP12.82□□□□□ -0.36
CHD4-202ENST00000430771 LZTS2Q9BRK4 669 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
CHD4-202ENST00000430771 FEM1BQ9UK73 627 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
CHD4-202ENST00000430771 MYPNQ86TC9 1320 aa12.82□□□□□ -0.36
CHD4-202ENST00000430771 TMEM232C9JQI7 657 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
CHD4-202ENST00000430771 PLA2G6O60733 806 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 FLOT1O75955 427 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 HOXA7P31268 230 aaPredicted RBP12.81□□□□□ -0.36
CHD4-202ENST00000430771 MAP2K2P36507 400 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 HTRA3P83110 453 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
CHD4-202ENST00000430771 MOGSQ13724 837 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 KIAA1755Q5JYT7 1200 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
CHD4-202ENST00000430771 RASGRP2Q7LDG7 609 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 RAB11FIP4Q86YS3 637 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 CHURC1Q8WUH1 139 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 NUP88Q99567 741 aaPredicted RBP12.81□□□□□ -0.36
CHD4-202ENST00000430771 SLF1Q9BQI6 1058 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 MAD2L2Q9UI95 211 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 TPCN1Q9ULQ1 816 aa12.81□□□□□ -0.36
CHD4-202ENST00000430771 PALM3A6NDB9 673 aaPredicted RBP12.8□□□□□ -0.36
CHD4-202ENST00000430771 BTBD19C9JJ37 291 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 CPLX1O14810 134 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 PFKFB2O60825 505 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 AOC2O75106 756 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 CDKL5O76039 1030 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
CHD4-202ENST00000430771 VEGFBP49765 207 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 FANCBQ8NB91 859 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 SNX21Q969T3 373 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 GPCPD1Q9NPB8 672 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 PPP1R9AQ9ULJ8 1098 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 MYH6P13533 1939 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 RLFQ13129 1914 aa12.8□□□□□ -0.36
CHD4-202ENST00000430771 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 PDHXO00330 501 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 GOLGA8HP0CJ92 632 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 FDX1P10109 184 aa12.79□□□□□ -0.36
CHD4-202ENST00000430771 STK3Q13188 491 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms