RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 PRR33A8MZF0 331 aa12.26□□□□□ -0.45
ATG4B-212ENST00000430617 SH3RF3Q8TEJ3 882 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-212ENST00000430617 C12orf42Q96LP6 360 aa12.26□□□□□ -0.45
ATG4B-212ENST00000430617 SIL1Q9H173 461 aa12.26□□□□□ -0.45
ATG4B-212ENST00000430617 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-212ENST00000430617 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
ATG4B-212ENST00000430617 SPTBN4Q9H254 2564 aa12.26□□□□□ -0.45
ATG4B-212ENST00000430617 PNMA6EA0A0J9YXQ4 647 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 ZBTB22O15209 634 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 TAL1P17542 331 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-212ENST00000430617 ERICH6Q7L0X2 663 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 RNF180Q86T96 592 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 METTL16Q86W50 562 aaKnown RBP12.25□□□□□ -0.45
ATG4B-212ENST00000430617 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
ATG4B-212ENST00000430617 MAML3Q96JK9 1138 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 FBXL18Q96ME1 805 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
ATG4B-212ENST00000430617 ZDBF2Q9HCK1 2354 aa12.25□□□□□ -0.45
ATG4B-212ENST00000430617 ADAMTS4O75173 837 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 RARBP10826 455 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 VCAM1P19320 739 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 ACLYP53396 1101 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 POLA2Q14181 598 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 PDS5AQ29RF7 1337 aaKnown RBP12.24□□□□□ -0.45
ATG4B-212ENST00000430617 PPP2R2DQ66LE6 453 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 SPTY2D1Q68D10 685 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-212ENST00000430617 PSRC1Q6PGN9 363 aaPredicted RBP12.24□□□□□ -0.45
ATG4B-212ENST00000430617 TBC1D9Q6ZT07 1266 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 NAV1Q8NEY1 1877 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 SSH3Q8TE77 659 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 PPP1R12CQ9BZL4 782 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 STARD7Q9NQZ5 370 aa12.24□□□□□ -0.45
ATG4B-212ENST00000430617 EPOPA6NHQ4 379 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 STRNO43815 780 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 GH2P01242 217 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 ERCC3P19447 782 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 POU3F3P20264 500 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-212ENST00000430617 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-212ENST00000430617 ATP8B2P98198 1209 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 PI16Q6UXB8 463 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 ACER1Q8TDN7 264 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 UIMC1Q96RL1 719 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 PHOX2BQ99453 314 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 DHX36Q9H2U1 1008 aaKnown RBP12.23□□□□□ -0.45
ATG4B-212ENST00000430617 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 PALD1Q9ULE6 856 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 COG5Q9UP83 839 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
ATG4B-212ENST00000430617 APBB1O00213 710 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 HMMRO75330 724 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-212ENST00000430617 CYP2C18P33260 490 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 CDK7P50613 346 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 TIMM10P62072 90 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 CCSAPQ6IQ19 270 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-212ENST00000430617 OTOP2Q7RTS6 562 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 FOXP4Q8IVH2 680 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-212ENST00000430617 MAPKAPK5Q8IW41 473 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-212ENST00000430617 FEZ1Q99689 392 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 RPAP3Q9H6T3 665 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-212ENST00000430617 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 CERS4Q9HA82 394 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 IL23AQ9NPF7 189 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 TET1Q8NFU7 2136 aa12.22□□□□□ -0.45
ATG4B-212ENST00000430617 ROBO3Q96MS0 1386 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 FLT1P17948 1338 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 SYNRGQ9UMZ2 1314 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 MYADML2A6NDP7 307 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 ZNF865P0CJ78 1059 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-212ENST00000430617 KCNA10Q16322 511 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 HLA-CQ95604 372 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
ATG4B-212ENST00000430617 DCHS1Q96JQ0 3298 aa12.21□□□□□ -0.45
ATG4B-212ENST00000430617 TRIP12Q14669 1992 aaPredicted RBP12.21□□□□□ -0.46
ATG4B-212ENST00000430617 SIP14410 1827 aa12.21□□□□□ -0.46
ATG4B-212ENST00000430617 UMODL1Q5DID0 1318 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 SRGAP3O43295 1099 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 CIAO1O76071 339 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 FGBP02675 491 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 LDHCP07864 332 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 SKAP1Q86WV1 359 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 SHCBP1Q8NEM2 672 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 KLHDC9Q8NEP7 349 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 NUP133Q8WUM0 1156 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATG4B-212ENST00000430617 HMG20BQ9P0W2 317 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 SAP30BPQ9UHR5 308 aaKnown RBP12.2□□□□□ -0.46
ATG4B-212ENST00000430617 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
ATG4B-212ENST00000430617 PGK2P07205 417 aa12.19□□□□□ -0.46
ATG4B-212ENST00000430617 GSTO1P78417 241 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms