RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
MARK3-205ENST00000429436 TAB2Q9NYJ8 693 aa16.59■□□□□ 0.25
MARK3-205ENST00000429436 TFR2Q9UP52 801 aa16.59■□□□□ 0.25
MARK3-205ENST00000429436 MRFAP1Q9Y605 127 aa16.59■□□□□ 0.25
MARK3-205ENST00000429436 EIF3JO75822 258 aaKnown RBP16.58■□□□□ 0.25
MARK3-205ENST00000429436 WDR19Q8NEZ3 1342 aa16.58■□□□□ 0.25
MARK3-205ENST00000429436 CCDC196A0A1B0GTZ2 297 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 VEGFAP15692 232 aaPredicted RBP16.58■□□□□ 0.24
MARK3-205ENST00000429436 VSNL1P62760 191 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
MARK3-205ENST00000429436 PIK3AP1Q6ZUJ8 805 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 RABGGTAQ92696 567 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 PLA2G12BQ9BX93 195 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 CENPHQ9H3R5 247 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 SRPRBQ9Y5M8 271 aaKnown RBP16.58■□□□□ 0.24
MARK3-205ENST00000429436 ATP8B1O43520 1251 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 KIF5CO60282 957 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 PLCD1P51178 756 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
MARK3-205ENST00000429436 FOXP1Q9H334 677 aaPredicted RBP16.58■□□□□ 0.24
MARK3-205ENST00000429436 ZNF18P17022 549 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 KCNJ6P48051 423 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 SLF1Q9BQI6 1058 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 CEP131Q9UPN4 1083 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 FRMD3A2A2Y4 597 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 CYP19A1P11511 503 aaPredicted RBP16.57■□□□□ 0.24
MARK3-205ENST00000429436 XBP1P17861 261 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 KCNA4P22459 653 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 IGHMBP2P38935 993 aaKnown RBP16.57■□□□□ 0.24
MARK3-205ENST00000429436 FXR1P51114 621 aaKnown RBP eCLIP16.57■□□□□ 0.24
MARK3-205ENST00000429436 KCNQ4P56696 695 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
MARK3-205ENST00000429436 TBX2Q13207 712 aaPredicted RBP16.57■□□□□ 0.24
MARK3-205ENST00000429436 PTGDRQ13258 359 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 NR1I3Q14994 352 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 FILIP1LQ4L180 1135 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 CCDC151A5D8V7 595 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 IPO7O95373 1038 aaKnown RBP16.57■□□□□ 0.24
MARK3-205ENST00000429436 CASP8Q14790 479 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 BEND6Q5SZJ8 279 aaPredicted RBP16.57■□□□□ 0.24
MARK3-205ENST00000429436 AP1ARQ63HQ0 302 aa16.57■□□□□ 0.24
MARK3-205ENST00000429436 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
MARK3-205ENST00000429436 KRT2P35908 639 aa16.56■□□□□ 0.24
MARK3-205ENST00000429436 ZKSCAN8Q15776 578 aaPredicted RBP16.56■□□□□ 0.24
MARK3-205ENST00000429436 ESR2Q92731 530 aa16.56■□□□□ 0.24
MARK3-205ENST00000429436 MAGEB6P1A0A0J9YX57 407 aa16.56■□□□□ 0.24
MARK3-205ENST00000429436 DPYDQ12882 1025 aa16.56■□□□□ 0.24
MARK3-205ENST00000429436 GSPT2Q8IYD1 628 aaKnown RBP16.56■□□□□ 0.24
MARK3-205ENST00000429436 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
MARK3-205ENST00000429436 RASGRP4Q8TDF6 673 aa16.56■□□□□ 0.24
MARK3-205ENST00000429436 RNF40O75150 1001 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 NLRP5P59047 1200 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 NKX1-1Q15270 411 aaPredicted RBP16.55■□□□□ 0.24
MARK3-205ENST00000429436 RSRC2Q7L4I2 434 aaKnown RBP16.55■□□□□ 0.24
MARK3-205ENST00000429436 CATIPQ7Z7H3 387 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 ANKZF1Q9H8Y5 726 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 GUCA1BQ9UMX6 200 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 NIP7Q9Y221 180 aaKnown RBP eCLIP16.55■□□□□ 0.24
MARK3-205ENST00000429436 ENC1O14682 589 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 ADAMTS3O15072 1205 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
MARK3-205ENST00000429436 KIFC2Q96AC6 838 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 PSD3Q9NYI0 1048 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 TRIM10Q9UDY6 481 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 LRRIQ3A6PVS8 624 aaPredicted RBP16.55■□□□□ 0.24
MARK3-205ENST00000429436 TUBB4AP04350 444 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 SARSP49591 514 aaKnown RBP16.55■□□□□ 0.24
MARK3-205ENST00000429436 CHRNDQ07001 517 aa16.55■□□□□ 0.24
MARK3-205ENST00000429436 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
MARK3-205ENST00000429436 ADAMTS7Q9UKP4 1686 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
MARK3-205ENST00000429436 ERLIN1O75477 346 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 ERCC3P19447 782 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 BORCS6Q96GS4 357 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
MARK3-205ENST00000429436 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 USP17L21D6R901 530 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 CUL4BQ13620 913 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.54■□□□□ 0.24
MARK3-205ENST00000429436 STAG1Q8WVM7 1258 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 GDAQ9Y2T3 454 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 FAM237AA0A1B0GTK4 181 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 GOLGA6L9A6NEM1 432 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 HNRNPH1P31943 449 aaKnown RBP16.54■□□□□ 0.24
MARK3-205ENST00000429436 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 KANK3Q6NY19 840 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 KIRREL3Q8IZU9 778 aa16.54■□□□□ 0.24
MARK3-205ENST00000429436 KCPQ6ZWJ8 1503 aa16.53■□□□□ 0.24
MARK3-205ENST00000429436 A0A1B0GTH6 734 aa16.53■□□□□ 0.24
MARK3-205ENST00000429436 MAP2K7O14733 419 aa16.53■□□□□ 0.24
MARK3-205ENST00000429436 FGFR2P21802 821 aa16.53■□□□□ 0.24
MARK3-205ENST00000429436 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms