RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZNF341Q9BYN7 854 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 UBA5Q9GZZ9 404 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 CABP5Q9NP86 173 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 KCNJ14Q9UNX9 436 aa10.31□□□□□ -0.76
SMC6-204ENST00000428868 CCDC196A0A1B0GTZ2 297 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 KLRF2D3W0D1 207 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
SMC6-204ENST00000428868 RAD21O60216 631 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 DEXIO95424 95 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 NDUFB10O96000 172 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 KIF5BP33176 963 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 SLC16A2P36021 539 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 ZYXQ15942 572 aaKnown RBP10.3□□□□□ -0.76
SMC6-204ENST00000428868 CCDC96Q2M329 555 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
SMC6-204ENST00000428868 SLFN13Q68D06 897 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 KRT40Q6A162 431 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
SMC6-204ENST00000428868 MOB2Q70IA6 237 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 KRT26Q7Z3Y9 468 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 GPKOWQ92917 476 aaPredicted RBP eCLIP10.3□□□□□ -0.76
SMC6-204ENST00000428868 DCPSQ96C86 337 aaKnown RBP10.3□□□□□ -0.76
SMC6-204ENST00000428868 CDCA5Q96FF9 252 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 WRNIP1Q96S55 665 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 RRAGCQ9HB90 399 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 VPS54Q9P1Q0 977 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 ZNF112Q9UJU3 913 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 PPP2R3BQ9Y5P8 575 aa10.3□□□□□ -0.76
SMC6-204ENST00000428868 V9GY48 417 aaPredicted RBP10.3□□□□□ -0.76
SMC6-204ENST00000428868 F5H6K3 240 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 H3BQV1 296 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 USP2O75604 605 aaPredicted RBP10.29□□□□□ -0.76
SMC6-204ENST00000428868 TAL1P17542 331 aaPredicted RBP10.29□□□□□ -0.76
SMC6-204ENST00000428868 PDCP20941 246 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 KLRC3Q07444 240 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 PPP2R5BQ15173 497 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 DCAF15Q66K64 600 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 SULF1Q8IWU6 871 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 TRIM22Q8IYM9 498 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 SPICE1Q8N0Z3 855 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 FBXO18Q8NFZ0 1043 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 KLRG1Q96E93 195 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 PIGSQ96S52 555 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 NMRK2Q9NPI5 230 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
SMC6-204ENST00000428868 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
SMC6-204ENST00000428868 IQCA1LA6NCM1 817 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 TRAF5O00463 557 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 CTNND1O60716 968 aaKnown RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 ASNSP08243 561 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 MCM4P33991 863 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 SNAP25P60880 206 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 KIF23Q02241 960 aaPredicted RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 DNM1Q05193 864 aaKnown RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 NBR1Q14596 966 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 NPY5RQ15761 445 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 ASPRV1Q53RT3 343 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 MAP1SQ66K74 1059 aaPredicted RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 MCTP1Q6DN14 999 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 CLEC17AQ6ZS10 378 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.28□□□□□ -0.76
SMC6-204ENST00000428868 HOMER1Q86YM7 354 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 SCYL3Q8IZE3 742 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 GMCL1P1Q8NEA9 526 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMC6-204ENST00000428868 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 DCAF4Q8WV16 495 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 SPZ1Q9BXG8 430 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMC6-204ENST00000428868 RIOX1Q9H6W3 641 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 ARHGEF10LQ9HCE6 1279 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 VAT1LQ9HCJ6 419 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 TMX2Q9Y320 296 aa10.28□□□□□ -0.76
SMC6-204ENST00000428868 ZNFX1Q9P2E3 1918 aaKnown RBP10.27□□□□□ -0.76
SMC6-204ENST00000428868 USP17L10C9JJH3 530 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 TOMM70O94826 608 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 SCG2P13521 617 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 PFKFB3Q16875 520 aaPredicted RBP10.27□□□□□ -0.77
SMC6-204ENST00000428868 FAM83BQ5T0W9 1011 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 ADGRF4Q8IZF3 695 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
SMC6-204ENST00000428868 VCPKMTQ9H867 229 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 JMJD4Q9H9V9 463 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 ISY1Q9ULR0 285 aaKnown RBP10.27□□□□□ -0.77
SMC6-204ENST00000428868 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 KIF3AQ9Y496 699 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 SNCAIPQ9Y6H5 919 aa10.27□□□□□ -0.77
SMC6-204ENST00000428868 BTBD18B2RXH4 712 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 STXBP3O00186 592 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 MMP1P03956 469 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 BMP3P12645 472 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 PTPRAP18433 802 aa10.26□□□□□ -0.77
SMC6-204ENST00000428868 SLC1A4P43007 532 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms