RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 KCTD1Q719H9 257 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 LPAR1Q92633 364 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 TANGO6Q9C0B7 1094 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 GPCPD1Q9NPB8 672 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 TMOD4Q9NZQ9 345 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 OTOFQ9HC10 1997 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 PTPDC1A2A3K4 754 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 TMEM88BA6NKF7 163 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 PPFIA3O75145 1194 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 SNHG28P0DPA3 235 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 BMP3P12645 472 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 VCAM1P19320 739 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 CDC27P30260 824 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 ZNF543Q08ER8 600 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 DGKZQ13574 1117 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 CUL4AQ13619 759 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 PPP2R5BQ15173 497 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 GPATCH4Q5T3I0 446 aaKnown RBP9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 TMTC3Q6ZXV5 915 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 DDX11Q96FC9 970 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 WNK4Q96J92 1243 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 IPO9Q96P70 1041 aaKnown RBP9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 MAP3K14Q99558 947 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 LZTS2Q9BRK4 669 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 AFG3L2Q9Y4W6 797 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 MYH8P13535 1937 aa9.2□□□□□ -0.94
HMGA1P4-201ENST00000428643 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 C19orf81C9J6K1 198 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 KLRF2D3W0D1 207 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 IRF6O14896 467 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 WDR46O15213 610 aaKnown RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 JAK2O60674 1132 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 DTNBO60941 627 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 GJA5P36382 358 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 AKAP17AQ02040 695 aaKnown RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 SNAPC2Q13487 334 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 KIAA1755Q5JYT7 1200 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 SAPCD2Q86UD0 394 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 TRIM22Q8IYM9 498 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 CMTR1Q8N1G2 835 aaKnown RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 STAG2Q8N3U4 1231 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 PHKBQ93100 1093 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 C12orf42Q96LP6 360 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 LLPHQ9BRT6 129 aaKnown RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 SLC26A6Q9BXS9 759 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 CPVLQ9H3G5 476 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 RPAP3Q9H6T3 665 aaPredicted RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 EMILIN3Q9NT22 766 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 FAM217BQ9NTX9 383 aaPredicted RBP9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 MAD2L2Q9UI95 211 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 SMC3Q9UQE7 1217 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 TLL2Q9Y6L7 1015 aa9.19□□□□□ -0.94
HMGA1P4-201ENST00000428643 A0A0G2JLL6 359 aaPredicted RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 TMEM232C9JQI7 657 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 CXCL11O14625 94 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 CTDNEP1O95476 244 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 ZBTB48P10074 688 aaPredicted RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 CETPP11597 493 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 IFNAR1P17181 557 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 SLC16A2P36021 539 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 STAT2P52630 851 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 GTF2A2P52657 109 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 FOSBP53539 338 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 HMGN5P82970 282 aaKnown RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 C1QBPQ07021 282 aaKnown RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 GRM1Q13255 1194 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 SYDE2Q5VT97 1194 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 SPRYD7Q5W111 196 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 TTBK2Q6IQ55 1244 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 RGMBQ6NW40 437 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 PRRT2Q7Z6L0 340 aaPredicted RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 HOMER1Q86YM7 354 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 RASAL3Q86YV0 1011 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 SRBD1Q8N5C6 995 aaKnown RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 FAM184AQ8NB25 1140 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 NSUN7Q8NE18 718 aaKnown RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 CNTNAP5Q8WYK1 1306 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 INTS4Q96HW7 963 aaKnown RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 UBA5Q9GZZ9 404 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 SEC63Q9UGP8 760 aaKnown RBP9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 KCNH4Q9UQ05 1017 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 KIF3AQ9Y496 699 aa9.18□□□□□ -0.94
HMGA1P4-201ENST00000428643 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 STK36Q9NRP7 1315 aa9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 CCL15-CCL14A0A0B4J2E2 113 aa9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 hCG_1642624A0A1W2PR95 340 aa9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 FLOT1O75955 427 aa9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 HSPA6P17066 643 aa9.17□□□□□ -0.94
HMGA1P4-201ENST00000428643 GJB2P29033 226 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms