RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 GMCL1Q96IK5 515 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 TMEM47Q9BQJ4 181 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 ZKSCAN3Q9BRR0 538 aa29.6■■■□□ 2.33
HERPUD2-205ENST00000427455 CTGFP29279 349 aa29.59■■■□□ 2.33
HERPUD2-205ENST00000427455 DGKHQ86XP1 1220 aa29.59■■■□□ 2.33
HERPUD2-205ENST00000427455 NCOA7Q8NI08 942 aa29.59■■■□□ 2.33
HERPUD2-205ENST00000427455 TRIM47Q96LD4 638 aa29.59■■■□□ 2.33
HERPUD2-205ENST00000427455 ZSCAN10Q96SZ4 725 aaPredicted RBP29.59■■■□□ 2.33
HERPUD2-205ENST00000427455 FMNL1O95466 1100 aaPredicted RBP29.58■■■□□ 2.33
HERPUD2-205ENST00000427455 RNF20Q5VTR2 975 aa29.58■■■□□ 2.33
HERPUD2-205ENST00000427455 MB21D1Q8N884 522 aa29.58■■■□□ 2.33
HERPUD2-205ENST00000427455 UBAC1Q9BSL1 405 aa29.58■■■□□ 2.33
HERPUD2-205ENST00000427455 FBXO28Q9NVF7 368 aa29.58■■■□□ 2.33
HERPUD2-205ENST00000427455 PPP1R9AQ9ULJ8 1098 aa29.58■■■□□ 2.33
HERPUD2-205ENST00000427455 TNKSO95271 1327 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 CNMDO75829 334 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 ECM2O94769 699 aaPredicted RBP29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 REC8O95072 547 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 BMP3P12645 472 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 SLC1A4P43007 532 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 ATG4CQ96DT6 458 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 SLF1Q9BQI6 1058 aa29.57■■■□□ 2.32
HERPUD2-205ENST00000427455 PEX10O60683 326 aa29.56■■■□□ 2.32
HERPUD2-205ENST00000427455 CYB5R4Q7L1T6 521 aa29.56■■■□□ 2.32
HERPUD2-205ENST00000427455 ENAHQ8N8S7 591 aaPredicted RBP29.56■■■□□ 2.32
HERPUD2-205ENST00000427455 BTBD7Q9P203 1132 aa29.56■■■□□ 2.32
HERPUD2-205ENST00000427455 MCCP23508 829 aa29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 FBXO46Q6PJ61 603 aaPredicted RBP29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 SAMD1Q6SPF0 538 aaPredicted RBP29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 DCAF4Q8WV16 495 aa29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 ANKS1AQ92625 1134 aa29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 FEM1BQ9UK73 627 aa29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 ISY1Q9ULR0 285 aaKnown RBP29.55■■■□□ 2.32
HERPUD2-205ENST00000427455 TNPO2O14787 897 aaKnown RBP29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 HOXD10P28358 340 aa29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 PRMT2P55345 433 aa29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 CCNA1P78396 465 aa29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 MB21D2Q8IYB1 491 aaPredicted RBP29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 ADAMTS5Q9UNA0 930 aa29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 PTPN22Q9Y2R2 807 aa29.54■■■□□ 2.32
HERPUD2-205ENST00000427455 STAT2P52630 851 aa29.53■■■□□ 2.32
HERPUD2-205ENST00000427455 Q3C1V9 767 aa29.53■■■□□ 2.32
HERPUD2-205ENST00000427455 PRPF38AQ8NAV1 312 aaKnown RBP29.53■■■□□ 2.32
HERPUD2-205ENST00000427455 KAT14Q9H8E8 782 aa29.53■■■□□ 2.32
HERPUD2-205ENST00000427455 SRRDQ9UH36 339 aa29.53■■■□□ 2.32
HERPUD2-205ENST00000427455 MTMR7Q9Y216 660 aa29.53■■■□□ 2.32
HERPUD2-205ENST00000427455 HTTP42858 3142 aa29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 VWA5AO00534 786 aa29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 MAPK4P31152 587 aa29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 CCDC96Q2M329 555 aa29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 RASGRP2Q7LDG7 609 aa29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 COA7Q96BR5 231 aa29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 COL11A1P12107 1806 aaPredicted RBP29.52■■■□□ 2.32
HERPUD2-205ENST00000427455 TMEM232C9JQI7 657 aa29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 EPB41L2O43491 1005 aaKnown RBP29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 SART3Q15020 963 aaKnown RBP29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 SEC23AQ15436 765 aa29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 IFIT1BQ5T764 474 aaKnown RBP29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 FAM160B2Q86V87 743 aa29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 CCAR1Q8IX12 1150 aaKnown RBP29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 PNMA1Q8ND90 353 aa29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 PORCNQ9H237 461 aa29.51■■■□□ 2.31
HERPUD2-205ENST00000427455 ERICH2A1L162 156 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 PLA2G6O60733 806 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 PDHBP11177 359 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 ZKSCAN1P17029 563 aaPredicted RBP29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 KCTD1Q719H9 257 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 CHURC1Q8WUH1 139 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 KIFC2Q96AC6 838 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 CHMP4CQ96CF2 233 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 SPATC1LQ9H0A9 340 aa29.5■■■□□ 2.31
HERPUD2-205ENST00000427455 IFIT3O14879 490 aaKnown RBP29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 SNHG28P0DPA3 235 aa29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 ANTXR2P58335 489 aa29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 PRKCZQ05513 592 aa29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 IKQ13123 557 aaPredicted RBP29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 TMEM132BQ14DG7 1078 aa29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 TSGA10IPQ3SY00 556 aa29.49■■■□□ 2.31
HERPUD2-205ENST00000427455 MCM5P33992 734 aa29.48■■■□□ 2.31
HERPUD2-205ENST00000427455 REPS2Q8NFH8 660 aa29.48■■■□□ 2.31
HERPUD2-205ENST00000427455 MOV10L1Q9BXT6 1211 aaKnown RBP29.48■■■□□ 2.31
HERPUD2-205ENST00000427455 PTCH2Q9Y6C5 1203 aa29.48■■■□□ 2.31
HERPUD2-205ENST00000427455 HSPA4P34932 840 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 KRT32Q14532 448 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 PLS1Q14651 629 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 CHST3Q7LGC8 479 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 GPR142Q7Z601 462 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 RASEFQ8IZ41 740 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 SHCBP1Q8NEM2 672 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 ABHD8Q96I13 439 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 MTA3Q9BTC8 594 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 CWC22Q9HCG8 908 aaKnown RBP29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 ZNF214Q9UL59 606 aaPredicted RBP29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 HPS5Q9UPZ3 1129 aa29.47■■■□□ 2.31
HERPUD2-205ENST00000427455 PRC1O43663 620 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 ZBED4O75132 1171 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 FDX1P10109 184 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 ZNF543Q08ER8 600 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 WTAPQ15007 396 aa29.46■■■□□ 2.31
HERPUD2-205ENST00000427455 TMEM67Q5HYA8 995 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms